Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5895g00005 ATGTCAGATGATCAATTCCAAGCGAGTGGAAACTGGTGGGAAACAGCGAGAAACGTGAGGTTCGAGAGTGGAGAATCTCAATCTTCATCTTCTGGCCTCACCAACATGGGAAACTACGGTTGGCAACATGACATGGCGAGGTCTTCTTCCATGGATAACTCTGCCTCGGGTGGTTCTTCATCTGTGGTTTTCCACGACCAGAAGCAGCTTCAGGTTCAACCCCATCATGACTCAGCCACCTCCACCAATGACCCCAACTTGCACATGATGGGCTTGGGCCTCTCGTCCCAACCCATGGACTGGAATCAAGCATCTTTGCAGCTGCGTGGTGAGAAGGGTTCAGAGGGCAGTTTCAGGTCGATGTTGCAAGAGAATTTGAGCTCATCAGGCACCAATTTTCAGCAGGAAAGTGGGAATAGCAATATTGGGTTATCTCATCATCATCATCAACATCAACATCAACATCAACATCATCAACAAGTTCATTGGAGGCCAGAAAAGCTGTTTTGTGCTGAGTCATCAAGCAATGAATTCAAGAGGGGTTTCTCCTTGGATCAAACGCAGTTTAGTCCTCAATATAGCTCTGGGGACAGCACTGTCACAAGCCAAGGTTTGCCTTGTACTTTTCAGATGGATTATGTTGGCAACCCTTCTTCAATATTGCAAGGACTTTTGGGACCTGAGAGCAATAACCAACAACCCCACCAAGGTAGTGGTTCGTTTGAGAATCGTCCCATGAATTTTCCTTACTCACCAGCAAGCTATGGATTAAACTCAAACATTGAGTTGGTCCCTTCTTGGTCTAAAGTCCCTCAGTTCTTAAGAGCTTCACCTCCTAAACAACCACCCAATAACCAGTTACATTTCACCAACAACGCTCCCTTTTGGAACGCTAGTTCTGAGCCTGCTATTAAGGACTCTCGATCCACCTTCATCCCCTCTTTGCAACCCCCCTTCTCCACCTCAAATTTCGATGTACAATCAAAGAATATATCTGAAGTTAGGGAATCGGGTGGTGTTGTGAAGAAAAGTGGGAGTGAGGCACCACCCAAAAGGCCTAGGAACGAAACCCCATCTCCTATGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTGGTTTCACCTTTCGGAAAGACTGATACAGCGTCAGTGCTCTCTGAAGCCATTGAATATATCAAATTCCTCCATGAACAAGTCACCGTTTTAAGCACTCCATATATGAAAAGTGGAGCTCCCATACAGCATCAGCAGAGTTCTGGTAAATCGAAGGAATGTGAGGGTCCAAAGCAGGATCTTAGAAGCCGAGGGCTATGCTTGGTGCCAGTTTCTAGTACATTTCCAGTGACTCACGAACCCACAGTTGAGTATTGGACACCGACATTTGGAGGAACTTACAGATAG 1428 0.4622 MSDDQFQASGNWWETARNVRFESGESQSSSSGLTNMGNYGWQHDMARSSSMDNSASGGSSSVVFHDQKQLQVQPHHDSATSTNDPNLHMMGLGLSSQPMDWNQASLQLRGEKGSEGSFRSMLQENLSSSGTNFQQESGNSNIGLSHHHHQHQHQHQHHQQVHWRPEKLFCAESSSNEFKRGFSLDQTQFSPQYSSGDSTVTSQGLPCTFQMDYVGNPSSILQGLLGPESNNQQPHQGSGSFENRPMNFPYSPASYGLNSNIELVPSWSKVPQFLRASPPKQPPNNQLHFTNNAPFWNASSEPAIKDSRSTFIPSLQPPFSTSNFDVQSKNISEVRESGGVVKKSGSEAPPKRPRNETPSPMPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQHQQSSGKSKECEGPKQDLRSRGLCLVPVSSTFPVTHEPTVEYWTPTFGGTYR 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5895g00005 475 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 355 404 IPR011598 GO:0046983
Mupr5895g00005 475 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 365 422 IPR036638 GO:0046983
Mupr5895g00005 475 Gene3D - 365 426 IPR036638 GO:0046983
Mupr5895g00005 475 MobiDBLite consensus disorder prediction 419 438 - -
Mupr5895g00005 475 MobiDBLite consensus disorder prediction 335 362 - -
Mupr5895g00005 475 MobiDBLite consensus disorder prediction 22 91 - -
Mupr5895g00005 475 CDD bHLH_AtbHLH_like 361 412 IPR045239 -
Mupr5895g00005 475 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 129 456 - -
Mupr5895g00005 475 FunFam Transcription factor bHLH123 family 365 427 - -
Mupr5895g00005 475 SMART finulus 366 410 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5895g00005 Mupr-Chr5895 25477 28836 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5895g00005 109 475 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 46.770 1.09e-78 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5895g00005 - - gmx:100818424 795.808