Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr588g00006 ATGGAATTTGCGCTAAATCAATGCCCTTTGCTGGGTTCCTTCGGGAATTTCGCTGAGACGGTCAAAAGGGTTGGTACCCTCTTCGTCTCTGCCATCATTGGGAACATCTTCTCTGCGATCTTCACCTTCTGCTTTGCATTAGTGGGCACTTTGTTGGGGGCTATGACAGGAGCCTTTATAGGCCAAGAGACAGAGAGTGGCTTCATTAGAGGGGCTGCTATTGGTGCCATATCAGGTGCTGTTTTCTCCATTGAAGTGTTTGAATCTTCCCTTGTTCTTTGGAAATCTGACGAATCTGGAATTGGGTGTGTCTTATACTTGGTTGATGTTATTGCTAGCCTACTAAGTGGGAGACTAGTGCGTGAAAGGATAGGTCCAGCCATGTTGAGTGCTGTCCAAAGTCAGATGGGTGCTGTTGAAATTAGCTTTGATGATGTTCAAAACATCTTTGACATTGGTGGCGCCAAAGGTTTACCGAGAGATTCACTTGAAAAGATCCCAAAGATCACCATTACAAGTGACAACAATGTTGATGCTTCTGGGGAGAGAGTTTCATGTTCAGTGTGCCTCCAGCTTGTGTATTTTGAAATTGATATTGTGAGTGTGTGCATTTCCTTCCAGGACTTTCAGCTTGGGGAGACAGGTAGAAGTTTGCCTCATTGTCATCACATGTTTCACCTACCTTGCATTGATAAGTGGCTGATCAAGCATGGTTCGTGCCCATTATGCAGAAGGGATCTCTAA 744 0.4489 MEFALNQCPLLGSFGNFAETVKRVGTLFVSAIIGNIFSAIFTFCFALVGTLLGAMTGAFIGQETESGFIRGAAIGAISGAVFSIEVFESSLVLWKSDESGIGCVLYLVDVIASLLSGRLVRERIGPAMLSAVQSQMGAVEISFDDVQNIFDIGGAKGLPRDSLEKIPKITITSDNNVDASGERVSCSVCLQLVYFEIDIVSVCISFQDFQLGETGRSLPHCHHMFHLPCIDKWLIKHGSCPLCRRDL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr588g00006 247 SMART ring_2 186 243 IPR001841 -
Mupr588g00006 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 247 IPR013083 -
Mupr588g00006 247 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 16 246 IPR044523 -
Mupr588g00006 247 SUPERFAMILY RING/U-box 185 247 - -
Mupr588g00006 247 ProSiteProfiles Zinc finger RING-type profile. 186 244 IPR001841 -
Mupr588g00006 247 Pfam RING-H2 zinc finger domain 201 244 IPR024766 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr588g00006 Mupr-Chr588 28039 29475 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr588g00006 29 247 C3H Transcription Factor Family AT5G66070 73.059 2.00e-109 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr588g00006 - - gmx:100816939 414.846