Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5888g00005 ATGGGGCAATTTGCAGTCGAAGAGGAAAGTGCTGTTCAACGAAATGGCGTGCAGACATTTTTGTTCCTTTGCTCTCTTCATTTTCCATTCGTAGACGCCAAGAACCCTAACAGAATGCAGTGGACTTGGATAACTTGTGAGGGGTACATTTACTACATTGTGTTTCTGCAATTGTTTTCATCATTTGGTGTTGTGATGGATGGTGATAATGGTCTTAACATACGTAATTGGGGTTACTATGAACCGGCTACATCGTTTAAGAGCCACCTGGGGCTGCAGCTGATGTCATCTATGCCAGAAAAACCTTTGATTGGAGGGCGCAATGCGGCAGTTTTAGCTGGCTCTAATGGGGCATTTCACCATAGGGACATTGCTATGCCCCAAACTACATACCCTATGGAGTACATGAGGGATGCATGGATTAGTAGTCAGAGAGACAAGTATATGAATATGATACCTACGAATCATAATTATGGTGGTATTCCGGAGACATCTTCAGCACATCAAATTCAAATGATTCCACCACCGGAATTGCCGAAGGAAGAAAGGCCTGTGGAAGAGGCACCTGCCGTTACTGAGAAGGCGAATGGCGGCACTCATAAGAAAAGACAGGGCCCCAAGGTGCCCAAGTCTCCCAAGGCTAAGAAGCCCAAGAGGGGGCCTCGTGTGCCGAAGGATGAGAATGCTCCCTCAGTTCAACGTGCAAGGGTTCCAAAGAAAACTACCGAAATTGTAATAAATGGGATTGATATGGATATTTCTAGTATTCCAATTCCAGTTTGTTCATGTACCGGGGCACCTCAGCAGTGTTATAGATGGGGCTCCGGCGGTTGGCAGTCTGCATGCTGCACAACAGGCATGTCAGTGTATCCTTTGCCTATGAGTACCAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCAGCCGAGGGTTATAACTTTTCTAATCCGATTGATTTGAGGACATATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATTAGGTACATGGTCTCACTATATGTTGCTATGCGTACTCAGTACACGTTTTAA 1095 0.4521 MGQFAVEEESAVQRNGVQTFLFLCSLHFPFVDAKNPNRMQWTWITCEGYIYYIVFLQLFSSFGVVMDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLIGGRNAAVLAGSNGAFHHRDIAMPQTTYPMEYMRDAWISSQRDKYMNMIPTNHNYGGIPETSSAHQIQMIPPPELPKEERPVEEAPAVTEKANGGTHKKRQGPKVPKSPKAKKPKRGPRVPKDENAPSVQRARVPKKTTEIVINGIDMDISSIPIPVCSCTGAPQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIRYMVSLYVAMRTQYTF 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5888g00005 364 Pfam GAGA binding protein-like family 66 349 IPR010409 -
Mupr5888g00005 364 SMART GAGA_bind_2 66 349 IPR010409 -
Mupr5888g00005 364 PANTHER - 66 349 IPR010409 -
Mupr5888g00005 364 MobiDBLite consensus disorder prediction 201 219 - -
Mupr5888g00005 364 MobiDBLite consensus disorder prediction 174 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5888g00005 Mupr-Chr5888 14422 17965 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5888g00005 66 349 BBR or BPC Transcription factor family AT2G01930 52.525 3.74e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Mupr5888g00005 GAGA_bind 1.9e-110 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5888g00005 - - gmx:100784091 532.717