Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5887g00001 ATGGTAATGGCTGAGCCTCTTAATATTATTATTACAACTCTAAGGAATAAACTCAAGACGCTTTGTGCTGTGGATGGCTGGTCTTACGTCATTTTCTGGCGCATTCATCGGCAAAATTCCTTGTTGTTGACTGTGGAAGATGTGAATTATGAAGATCAATTGGGAGAAGAGATTGTCAACACAGTTCCACAGGTCCATTTGATGGGTGAAGGAATTGTTGGTAAAGCTGCTTTGACTGGCAAGCACAGATGGGTGGACTCAGATGGTCAAATGTGTGAGGATGATTATGGTTTGCATCAACAGTTCTCGTCTGGGATTAAGACAGTTGCGGTGATATCTTTTAAACCATGGGGAGTGGTACAATTTGGATCCAAAAAGAAGATTTTGGAGAGAGTGAAATTTGTGGAACAAACAGAAAGGTTGCTAAGGGGGATAGAAGATGAGGGTATTCTTGATGTATTAAATAACACAGTTCTAGCTCTGGATTGTGAAAATTATGATCTAAATGGATTTTTGGCTTCCACTTCTGAAAATTTATGTGATTGGAATCTCAAATCTGTTGTTCATGGTGACAACTCTGAAATGCTATTGGGAAATTCATGTTCCTCTACAAGTCTTGATGATTCCTTCCCTTCCATGGATATGATTCTTGAAGAAGGGACGACACTGATGCATGGATTTTCCTCTCATGTTGGTGACGAATTGGTACCTGCCATAGAAGCTCAAGCTGTGTTCTCAGATAGGGATAGTACTGATTATTCTATGAACAACTTAATTGCTAGAAACCCCAGTTTTGGCACATGGAGTGGCGAAGTTTCGTCACTGGATTCACTAGGGCAACAACTGGTATCTGAAATAAGGGCTCAAGATGTTGTGGATGTGCATTGTAAAGAAGCAAATGCATTACATAGTAACAAACTTGCACTTCAGGATTCAAAATTGACCTCATTAGCTAGTGTGAATGAACTGTTAGACCCAACTGGCCCATTTCAAGACCACAACATAGGAAGTTCACTGGATATCCAACATTCTGCTCAATCTAATATTGTGACACAAGTTAATTATCCTGATAGTTTCAGTATGATGCATGAGCACTCCAAGGACTTAGATCCAGTTGATACCTTGGAAGAATTTTCAAATTTCTTCTCCATGGATGATCTCTGCCAGCTGTTTGCTCCTTCTCAAGAGCACAGCATTTGTGGAACAGTGACTGCATTGGATGAGTCACAAGAATTTAATCCCACATGTTTTGGTCTGGCTGGTAATAGTGTCACATGTGAAGCTGTGCATAATAGTTACATCACAGCTACACCCAACTTGGATGGTCAAGAAACATCCACAGTTGTGCATAGTTCTGAAAACAGTCTCTTGGATAGCATGAGACATGATTTGAGCTGTGACTGTGATCAAGCTGAGGAGTGGTGGGGCAGTATGGCTATGCCTTCACCAGTGGTGACTGCTGCTGCTACTCACACTGCTTTATCTGATTGCATATCAGAGTTGAATGTTGGTACATTAGGTGGCTCTGGGAAGAGATTATTCTCAGAGTTAGGAATTGAAGAGTTTTTGAATGGTTCTAATTTTGAAGATCAATGTTCAACCAATAGAAAGCAGAGGACAGAATATTCACCACAGAATAGGAATCCAAAGCACTTGACAAGTCATGCTTTGGTTCAGCCTGTTCCTAAATTGGACCTGACAAACAATCTTGTACACAAGAAAGAGATATTCCCAAAGTCACAGGTAGGAGTAGGAGGCATATGGATAAATAACAGAAATACTAATACTGGTAGGGCTGTTCCAACACATGCACAATCTCAAAAGCCAGTGGAACACAATAAGGTCACCAGGAAGAGGGCTAGGCCGGGTGAATCAACTAGACCGAGACCAAAAGATCGTCAGCAGATTCAAGACCGCATTGGAGAGTTGAGAGGGATCATCCCCAATGGTGGAAAGTGTAGCATTGATTCATTGTTAGACCGAACCATCAGATACATGGTATTCTTACAAAGCATCACCAATTATGCAGACAAGCTACAAGAACCCAATGAGCCTAAGCTCATTAAGCAGACAAATGGAAAGGTTCTAAAAGACGGTAACGTGGGAGATAGCAAAAAAGGTGGTGGTGGTGTTACATGTGCATTTGAAGTGGAAGGCCAAACAATGGTATGTCCAATTATAGTGGAGGACATGGGCCCACCTGGCCAAATGCTTATAGAGATGCTTTTTGAAGATCAAGGTTCCTTTCTTGAGATAGTGGACATAGTTGGGGGGTTTGGGCTGAATATCTTGAAGGGGAAGATGGAAATCATGGAGAATAAAATATGGGCAAGCTTTATTGTTGAGGCGAACAGACATGTAACGAGGATAGATGTATTTTGGTTCCTCATTGATCTTCTACAACAGAAAAACACATCTGGAACGGATTCAGGTAATAAGCATTGTAATATTAATGGTGATGGCTTTTCTTCAATGGACAAATATGAGAAAACAGAGATGGCAGTACTACCCATGGTCATGACAAATTTAAGATAG 2535 0.4095 MVMAEPLNIIITTLRNKLKTLCAVDGWSYVIFWRIHRQNSLLLTVEDVNYEDQLGEEIVNTVPQVHLMGEGIVGKAALTGKHRWVDSDGQMCEDDYGLHQQFSSGIKTVAVISFKPWGVVQFGSKKKILERVKFVEQTERLLRGIEDEGILDVLNNTVLALDCENYDLNGFLASTSENLCDWNLKSVVHGDNSEMLLGNSCSSTSLDDSFPSMDMILEEGTTLMHGFSSHVGDELVPAIEAQAVFSDRDSTDYSMNNLIARNPSFGTWSGEVSSLDSLGQQLVSEIRAQDVVDVHCKEANALHSNKLALQDSKLTSLASVNELLDPTGPFQDHNIGSSLDIQHSAQSNIVTQVNYPDSFSMMHEHSKDLDPVDTLEEFSNFFSMDDLCQLFAPSQEHSICGTVTALDESQEFNPTCFGLAGNSVTCEAVHNSYITATPNLDGQETSTVVHSSENSLLDSMRHDLSCDCDQAEEWWGSMAMPSPVVTAAATHTALSDCISELNVGTLGGSGKRLFSELGIEEFLNGSNFEDQCSTNRKQRTEYSPQNRNPKHLTSHALVQPVPKLDLTNNLVHKKEIFPKSQVGVGGIWINNRNTNTGRAVPTHAQSQKPVEHNKVTRKRARPGESTRPRPKDRQQIQDRIGELRGIIPNGGKCSIDSLLDRTIRYMVFLQSITNYADKLQEPNEPKLIKQTNGKVLKDGNVGDSKKGGGGVTCAFEVEGQTMVCPIIVEDMGPPGQMLIEMLFEDQGSFLEIVDIVGGFGLNILKGKMEIMENKIWASFIVEANRHVTRIDVFWFLIDLLQQKNTSGTDSGNKHCNINGDGFSSMDKYEKTEMAVLPMVMTNLR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5887g00001 844 MobiDBLite consensus disorder prediction 528 553 - -
Mupr5887g00001 844 MobiDBLite consensus disorder prediction 595 635 - -
Mupr5887g00001 844 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 633 675 IPR036638 GO:0046983
Mupr5887g00001 844 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 13 828 IPR043561 GO:0003700|GO:0006355
Mupr5887g00001 844 MobiDBLite consensus disorder prediction 610 635 - -
Mupr5887g00001 844 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 62 140 IPR025610 -
Mupr5887g00001 844 MobiDBLite consensus disorder prediction 528 555 - -
Mupr5887g00001 844 MobiDBLite consensus disorder prediction 595 609 - -
Mupr5887g00001 844 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 620 669 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5887g00001 Mupr-Chr5887 3662 8424 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5887g00001 617 810 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 51.031 7.99e-57 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5887g00001 - - pvu:PHAVU_006G000400g 1238.4