Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr587g00002 ATGAAAAAGGATGTCCAAGATGGTATACACGATGTACCTGTTCAATCTTCTCGAGAGGCTTTAAATACTGCAAGTGAAAATGGCAATACGGCTCTTGCATTATTGGTTTCAGCATATGGAAATTCTTCTGACAGTGAGGAAGAACATATTGCAGTTGACAATAATGAATCAAATGTGATAAACTCTGCTTCAGAAAGTTTACGTTCTCATACTCAAGATTCTCATGCTAGTCCCATGACTGCACTTGATAAGGGAGATGATATTCCTTCAAAGAGTGCCAGTTGTGAGGATTTTATGCATCATAGATTTGAGTGTAATTTGAGCCATCAGTCTTTAGACCACTCTTTTAAGAAACAGGAATATAATAACACATCAGGGGTTACATCTGAAAATACGAGGGCAGTGCCTAATTCCCCCGCTAATTGTTCCCAAGATGCTCATGGTGCTGAAAGGTCATTGTCTAACAAGTCTATGGTTCCGTTTGATAATAAAAATGCTTCGATGGTGCTACAATCTGATGAAGACTCATCCAGAATGCATGTTTTTTGTCTAGAGCATGCTGCAGAAGCAGAGCAGCAACTTCGGCCAATAGGTGGAGCCCACATATTCCTCCTATGTCATCCAGATTTTCCCAAGATAGAGGCTGAAGCACAATCGGTGGCAGAAGATTTGGGGATTGATTACACATGGAAGGATATTCATTACAGGCATGCTTCCAAGGAGGATGAGGAGAGGATCCAGTTGGCTCTGGATAGTGAGGAAGCTATCCCTGGGAATGGTGATTGGGCTGTAAAGCTAGGAATTAATCTCTTTTATAGTGCAAATCTTAGCCGCTCTCCTCTTTATAGTAAGCAGATGCCTTACAATTCTGTTATATACTATGCATTTGGTTGTAGCTCTCCGGCAAGCTCACCAGTAGAGCCAAAGGTCTACCAAAGAAGGGTCAACAAGCAGAGAAAGGTTGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGTCCAATCAGGTCCATCCCCTTTTAGCAAAAAGAGATTCTGAAGATGTTGAGGATGAGAAACTCTTACTTGGGTGGATATTACCTGATGAGAAAATTGAGAGACCAGAAAGTACCCCCAAAAGTGAAACTACTAGCAGAAAATCAGGTAAGAAAAGGAAAATGACAGCAGAGAATGGACGAATGAGGAAAGGAAGTTATGCTAAGAAAAATGTAGTTTCAGATAATTCCACTGAAAATAAACCCAACTCACAGCCAAGGAGGGTTCTTAGAAGTAAGAAAGCCAGGCATGTTGAGAGAGACCATGCTGCTTTGAAAGGAGATTATTCTCCTCCATATCATCATAGAAAACCTATAAGCAAGCAAACAAACTGCAGTGAAAGTGATGCGGTTTCTGATGATTCGCTTGATGATGATGATGACATGCAGCATAGAAGGAATATTAATGTTGAAAAGGCTAAATTTAATGACAATGATGTGGTTTCAAATGATACAGTGGACTGTGATTCTGATTGGCAGCAGAGGGAAGAACTTAGCAGCAAGCAAGTTGAAGATACAGAGAGAGATGCAATTTCAGAGGATTCTTTGGATGTTGGTTCTCTTCAGCTGCAAAGGAAGACTTCCAGAGGCAAGCATGCCAAATACATTAGTGAAGAAGATATAATATCTGATGACCAAATGGAGAGTCGTTTTCAAAAGCGGCAAAGGAGAATTCCTAAAAGCAGGCAAGGCAAATACCTTACTGGAAGAGATATTATATCTGATGACCAAATAGTGCTGAAAATGCAGAAGCAGCAACGGAGGAATCCTAAAAGCAGGCAAGCCAAATACCTCAATGAAGAGGATATTGCTTCAGATGACCAATTGGAGGGCCATTATCGTAGGTATCAAAGAAGGACTCCTAAAGGCAGGCAGGAGAAAATGAAATGTGTAGCAGGGGAAGATGAAATGTCTGATGACCAATTGGAGGACCATTGTCAGAAACAGCAAACAAGTTTCTCTAGGGAAAGGCAAATCAAAGGCAATGATAGAGAAGTTAAAAATGTAATGTCTGATGACCAATTGGAGGATCATTTTCTGAAGCAGCAGAGAAGATTTCCTAAGAGCAGGCAAAACAAACACACTGATAAAGAAGTTATGGATGACTCGGCTGAAAATAATTCTCATTTGCTGCATAGAACTCCTAAAAGGAAGCAAACTAAATGCATGGATGAAGATGATATGAATTCAGATGATGAAATGGAAGAAGATCAGCAGCTGAGGAGGACTCTTCGAAGTAAACAATCTAAACCAAAGACACTTCAACAGATAAAACAAGCTAATTCCCTCCAAGTGAAAAGCCAGGCATCTCGGCCCATAAAACGGGGGGCTCGGATGCTAATGAAGTCAAAGGCTCCTCCGCAAACAAAACAGCCTTCTCATTTGCTGAATAAGCAATCTAAAGAGTTTAGTTTACATATGGAAGAGGAGGAAGAAGGTGGGCCTAGCACAAGGCTTAGGAAGAGAGCCACAAAAGCTCAGGAATCTGAAGGAAAATTGAAAGACAAGCAAACAAAAAGGAAGAAGGTGAAGAATGCTACAGCTGCAAAGGTTTCAGTTGGCCATGCCAAAGTGAAGGATGAGGAAGCAGAATATCAGTGTGACATTGATGGGTGCACTATGAGTTTTGGGTCAAAACAGGAGCTTTTGCATCATAAGAGAAATATCTGCCCTGTAAAAGGGTGTGGGAAAAAGTTTTTCTCACACAAGTATCTGGTGCAGCACCGTCGAGTTCATGAGGATGAACGACCCTTGAAGTGCCCCTGGAAGGGATGCAAGATGACTTTCAAGTGGGCATGGGCTCGTACTGAGCACATTAGAGTCCACACTGGTGCAAGGCCTTATGTATGTGCTGAGCCTGGTTGTGGACAAACATTCAGATTTGTGTCTGATTTCAGTCGTCATAAGCGAAAGACTGGTCATTCAGCAAAGAAGAGTCGTCAATAG 2979 0.4152 MKKDVQDGIHDVPVQSSREALNTASENGNTALALLVSAYGNSSDSEEEHIAVDNNESNVINSASESLRSHTQDSHASPMTALDKGDDIPSKSASCEDFMHHRFECNLSHQSLDHSFKKQEYNNTSGVTSENTRAVPNSPANCSQDAHGAERSLSNKSMVPFDNKNASMVLQSDEDSSRMHVFCLEHAAEAEQQLRPIGGAHIFLLCHPDFPKIEAEAQSVAEDLGIDYTWKDIHYRHASKEDEERIQLALDSEEAIPGNGDWAVKLGINLFYSANLSRSPLYSKQMPYNSVIYYAFGCSSPASSPVEPKVYQRRVNKQRKVVAGKWCGKVWMSNQVHPLLAKRDSEDVEDEKLLLGWILPDEKIERPESTPKSETTSRKSGKKRKMTAENGRMRKGSYAKKNVVSDNSTENKPNSQPRRVLRSKKARHVERDHAALKGDYSPPYHHRKPISKQTNCSESDAVSDDSLDDDDDMQHRRNINVEKAKFNDNDVVSNDTVDCDSDWQQREELSSKQVEDTERDAISEDSLDVGSLQLQRKTSRGKHAKYISEEDIISDDQMESRFQKRQRRIPKSRQGKYLTGRDIISDDQIVLKMQKQQRRNPKSRQAKYLNEEDIASDDQLEGHYRRYQRRTPKGRQEKMKCVAGEDEMSDDQLEDHCQKQQTSFSRERQIKGNDREVKNVMSDDQLEDHFLKQQRRFPKSRQNKHTDKEVMDDSAENNSHLLHRTPKRKQTKCMDEDDMNSDDEMEEDQQLRRTLRSKQSKPKTLQQIKQANSLQVKSQASRPIKRGARMLMKSKAPPQTKQPSHLLNKQSKEFSLHMEEEEEGGPSTRLRKRATKAQESEGKLKDKQTKRKKVKNATAAKVSVGHAKVKDEEAEYQCDIDGCTMSFGSKQELLHHKRNICPVKGCGKKFFSHKYLVQHRRVHEDERPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSAKKSRQ 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr587g00002 992 MobiDBLite consensus disorder prediction 469 484 - -
Mupr587g00002 992 MobiDBLite consensus disorder prediction 427 446 - -
Mupr587g00002 992 ProSitePatterns Zinc finger C2H2 type domain signature. 931 953 IPR013087 -
Mupr587g00002 992 MobiDBLite consensus disorder prediction 556 578 - -
Mupr587g00002 992 MobiDBLite consensus disorder prediction 816 858 - -
Mupr587g00002 992 MobiDBLite consensus disorder prediction 593 783 - -
Mupr587g00002 992 PANTHER ZINC FINGER PROTEIN ZIC AND GLI 457 984 - -
Mupr587g00002 992 MobiDBLite consensus disorder prediction 122 147 - -
Mupr587g00002 992 ProSiteProfiles Zinc finger C2H2 type domain profile. 959 990 IPR013087 -
Mupr587g00002 992 MobiDBLite consensus disorder prediction 365 396 - -
Mupr587g00002 992 MobiDBLite consensus disorder prediction 604 627 - -
Mupr587g00002 992 SUPERFAMILY beta-beta-alpha zinc fingers 947 981 IPR036236 -
Mupr587g00002 992 Gene3D Classic Zinc Finger 927 955 - -
Mupr587g00002 992 Gene3D Classic Zinc Finger 956 991 - -
Mupr587g00002 992 Gene3D Classic Zinc Finger 897 926 - -
Mupr587g00002 992 MobiDBLite consensus disorder prediction 816 847 - -
Mupr587g00002 992 MobiDBLite consensus disorder prediction 64 78 - -
Mupr587g00002 992 ProSitePatterns Zinc finger C2H2 type domain signature. 901 923 IPR013087 -
Mupr587g00002 992 MobiDBLite consensus disorder prediction 401 416 - -
Mupr587g00002 992 Coils Coil 837 857 - -
Mupr587g00002 992 MobiDBLite consensus disorder prediction 64 87 - -
Mupr587g00002 992 ProSitePatterns Zinc finger C2H2 type domain signature. 961 985 IPR013087 -
Mupr587g00002 992 ProSiteProfiles Zinc finger C2H2 type domain profile. 899 928 IPR013087 -
Mupr587g00002 992 MobiDBLite consensus disorder prediction 760 780 - -
Mupr587g00002 992 MobiDBLite consensus disorder prediction 634 736 - -
Mupr587g00002 992 ProSiteProfiles Zinc finger C2H2 type domain profile. 929 958 IPR013087 -
Mupr587g00002 992 FunFam Probable lysine-specific demethylase ELF6 956 985 - -
Mupr587g00002 992 MobiDBLite consensus disorder prediction 500 525 - -
Mupr587g00002 992 SUPERFAMILY beta-beta-alpha zinc fingers 915 957 IPR036236 -
Mupr587g00002 992 MobiDBLite consensus disorder prediction 365 526 - -
Mupr587g00002 992 SMART c2h2final6 876 898 IPR013087 -
Mupr587g00002 992 SMART c2h2final6 899 923 IPR013087 -
Mupr587g00002 992 SMART c2h2final6 929 953 IPR013087 -
Mupr587g00002 992 SMART c2h2final6 959 985 IPR013087 -
Mupr587g00002 992 MobiDBLite consensus disorder prediction 1 25 - -
Mupr587g00002 992 FunFam Probable lysine-specific demethylase ELF6 926 955 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr587g00002 636 990 C2H2 Transcription Factor Family AT3G48430 40.865 2.52e-71 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr587g00002 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr587g00002 - - gmx:100775271 1677.92