Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr587g00001 ATGGGAGGAAGTTCGGAGGGAAACGGCGACGTTTTACCATGGCTGAAATCGCTGCCGGTGGCGCCGGAGTACAGGCCGAGCGCGGCGGAGTTCCAAGATCCAATCGGCTACATATTCAAGATCGAGAAGGAAGCTTCCAAGTACGGCATCTGCAAAATCATCCCTCCCTTCCCACCTTCCCCGAAGAAAACTGCCATCGCGAACCTCAACCGCTCACTCGCTGATACTGGTTCCACATTCACCACGCGCCAGCAGCAGATCGGGTTCTGCCCCCGCAGGCCCCGGCCCGTCAAGAGGCCCGTTTGGCAGAGCGGCGACCACTACACCTTCCAAGAGTTCGAGTCCAAGGCCAAGTCCTTCGAGAAGACTTACCTCAAGCGCCACGCCAAGAAGGGCTCGGGTACGGGCCTGGGCCCGCTCGAGACGGAAACACTCTTTTGGAAGGCCACGCTGGACAAACCCTTCTCCGTGGAGTACGCGAACGACATGCCGGGTTCCGCGTTTTCCCCCAAATGCCGGCACGCAGGGGATCCCAGCTCCCTTGCTGACACTCCTTGGAACATGAGAGCCGTTTCTCGGGCCAACGGTTCGCTCTTGCGGTTCATGAAGGAGGAGATTCCGGGCGTTACTTCCCCTATGGTCTATGTCGCCATGCTCTTCAGCTGGTTCGCCTGGCACGTCGAGGACCACGACTTGCACAGCTTGAATTACCTCCACATGGGCGCCGGCAAGACCTGGTACGGCGTCCCTCGCGATGCCGCCGTTGCCTTCGAGGAAGTCGTTAGGGTTCACGGCTACGGCGGGGAGATTAACCCTCTCGTTACTTTTGCTATTCTTGGTGAGAAAACCACAGTGATGTCGCCTGAAGTATTTGTTAGTGCAGGTGTTCCATGCTGCAGGTTAGTACAAAATGCTGGGGAATTTGTTGTGACGTTTCCAAGAGCCTATCATACAGGGTTTAGTCATGGATTTAATTGTGGGGAGGCAGCAAACATTGCAACACCTGAGTGGTTGAGGGTTGCTAAAGATGCTGCTATTCGGAGGGCTTCACTAAATTATCCTCCCATGGTTTCACATTTCCAGTTACTTTATGACCTTGCCTTAGCTTTGTGTTCTAGAATTCCTGTGGGCATCAGTGCTGAACCTCGTAGTTCTCGTCTTAAAGATAAGAAGAAGGGTGAAGGAGAAACTGTAATTAAAGAACTATTTGTCCAAGATGTGTTACAGAACAATGATCTGCTTCATATACTTGGGAAAGGATCTGCTGTAGTACTTCTTCCTCGTAGCTCAGTTGACATTTCTGTTTGCTCAAAATTACGTGTTGGATCCCAGCAATCCATCAATGTAAGCAACTCTGAGGGATTGCATTCCTCAAAAGGTTTTGTTTCTGATGATCTGGTATTCAACAGGAGTCATGGAATCAAGCTAGAACAATCTTTCTATTCTGTGAAAGACAAGTTTACTACGATGTGTGAAAGGAACAGGATTTCCTCTTTTGATGTAAATAGTAACACAAGCACTTCAAGTTCTAAGCCACTTCAAAGAGACACTGAAAGAGAAACTAGTCAAGGAGATGGGTTGTCAGATCAGAGATTCTTCTCATGTGTCACATGTGGAATATTAAGCTTTTCTTGTGTTGCTATTGTACAGCCTAGAGAACCAGCAGCTAGATATCTTATGTCAGCTGATTGTAGCTTCTTCAATGATTGGGTTGTTGGTTCTGGAGTATCTAGCAATAAATTTACTATTGCCCACGAAGATGCAACCATTCCTGAGCCAAATACGTATACAGGCAGTCTTGTCGGCTAG 1809 0.4936 MGGSSEGNGDVLPWLKSLPVAPEYRPSAAEFQDPIGYIFKIEKEASKYGICKIIPPFPPSPKKTAIANLNRSLADTGSTFTTRQQQIGFCPRRPRPVKRPVWQSGDHYTFQEFESKAKSFEKTYLKRHAKKGSGTGLGPLETETLFWKATLDKPFSVEYANDMPGSAFSPKCRHAGDPSSLADTPWNMRAVSRANGSLLRFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVHGYGGEINPLVTFAILGEKTTVMSPEVFVSAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASLNYPPMVSHFQLLYDLALALCSRIPVGISAEPRSSRLKDKKKGEGETVIKELFVQDVLQNNDLLHILGKGSAVVLLPRSSVDISVCSKLRVGSQQSINVSNSEGLHSSKGFVSDDLVFNRSHGIKLEQSFYSVKDKFTTMCERNRISSFDVNSNTSTSSSKPLQRDTERETSQGDGLSDQRFFSCVTCGILSFSCVAIVQPREPAARYLMSADCSFFNDWVVGSGVSSNKFTIAHEDATIPEPNTYTGSLVG 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr587g00001 602 Pfam jmjN domain 22 55 IPR003349 -
Mupr587g00001 602 SMART JmjN_1 20 61 IPR003349 -
Mupr587g00001 602 FunFam Probable lysine-specific demethylase ELF6 14 353 - -
Mupr587g00001 602 Gene3D Cupin 14 353 - -
Mupr587g00001 602 Pfam JmjC domain, hydroxylase 213 331 IPR003347 -
Mupr587g00001 602 ProSiteProfiles JmjC domain profile. 173 349 IPR003347 -
Mupr587g00001 602 ProSiteProfiles JmjN domain profile. 21 62 IPR003349 -
Mupr587g00001 602 SMART cupin_9 180 349 IPR003347 -
Mupr587g00001 602 PANTHER LYSINE-SPECIFIC DEMETHYLASE 13 549 - -
Mupr587g00001 602 MobiDBLite consensus disorder prediction 501 526 - -
Mupr587g00001 602 SUPERFAMILY Clavaminate synthase-like 104 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr587g00001 Mupr-Chr587 3998 9316 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr587g00001 7 559 C2H2 Transcription Factor Family AT5G04240 39.514 8.37e-147 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mupr587g00001 JmjC 1.7e-36 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr587g00001 - - gmx:100810972 1103.2