Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5878g00005 ATGGAATTGACAAGACCCAGTTACGCGGTTGTTTACGTCATTCTCCTTTGTGCGTTGGCCCAAGGGGGCTCAGAGGGGAAAGAAGGGGATTTTTCTAGAGATGGTGGAGGTTTGACACCATCCATTTATGTGCGTGGAATTAAGGTAGAGAGTGAATGGAAACATTGTAGGAAACAATTGATAAAGAAGAACAATGATGTGAAAGTTTTTGACTTGCATCCACAGGAAGGGAGCAGTGACATAAAAACTGTAGAAAATAGCATACACAAAGAAACAAAATCTCTGGCTCTCCATATGAAAAGAAAAACTTCAGACTGCATTAGCACTAGTACTACTCCTCATGCTCCTGTTTCAGAAAACAAAGGTAGCTCTAGATATTTGTTGACAAAGCATTCTGGATCAAACTTGGGTGTGGAAAGTGGTCATGGAAGAAATTTGCTTGCTGATTCACCAAATGATAAAATGTCACCAAGTCCTTCTCCTAGTGGGGAACCACCAAGTCATAGTCCAACACCAGCCAGTTCTCCGTCATCACCATCACCATCACCATCTCCATCATCACCATCACCATCTCCATCATCACCAACTACACCATCATCAACTCCATCATCAAAAACTCCACCGTCACCAACTCCATCATCACCAACTCCAACTCCCCAAGGTGTGGATTTACCACTCCCTCCAAATATGTTTGTACCATTTCCACCACCACCACCCCGAGCACCTCAACCTCCTTTTAAAAATTTTCAACCTATAGTACAAGTTCCTGCTCCTTCACCTAGCAATGATGGCAAAAAGAAGCAAACAGTTGTTTTAGCTGGCACTGCATCAGGAATTATAATCTTGGTAGGCATGTTCCTCTGCTGTTGGGAGGCCAGAAGCAACAGAGATGACAGAGATGACAGGCCTTTGCTCATATTAACCTCAAGTGATTATTCTGGTGGTTCACAGAAGGTTGTTAGATTAGGAGATACTGAGAAGAACGAATCTGGCATTAGCCTTGAAAAGATCCCTCCTGAGACCCCTTCAAAGGTCCCTTTAAAGGTCCCTTCAAAGATCCCATCTAACGTTAGAAATTGGTCCATTAGGGGTGGACACAACAATGCCTTACTGGTTGAGATATCAGAAGGTGTAGGACAAGTATCAGAAGGTGTAGGACAAGTATCAGAATCTGTAGGACAAGTTTCAGAAGCTGTAGGAAAAGTTTCAGAAACTGTAGGACAAGTACCAGAGCCTCCCGATGAAAAACCTGCTCCTCCACCCCCTGCCATACCACAACCACAACCACCACCACCACCACCTGCTGGACCACCACCACCCCCTGCTGGACCACCACCACCATCACCGCCTCCACGGCAGCCACCGCCTCCTGCTCCTCCGCAGCGGCCAGGGGCTCCTGCTCCTCCTCGTGCACCAGTACCACCCCCTCCAAGAGGAGGTGCTCATCCTCCACCTCCTCCCAAACCAATGACAGGTCAAGTACCACTGGCTCCTAAAGAGGGAAGTCCAAGTGAGAATGATGCTCCAAAAGCAAAACTAAAACCATTTTTCTGGGATAAGGTTAATGCAAAACCTGGCCAAACAATGGTGTGGAATGAGATTAGTGGAGGATCATTTGTGATCAATGAGGAAATGATGGAGTCTTTATTTGGCTTCACCGCCCAGAACAAGAACGAACGCAAAAAAGATCTAACTGCAGATACTTCAGTGCAATATATTCAGATTATTGACCCTAAGAAAGCGCAGAACTTATCAATTCTTTTGAAAGCTTTGAATGTGACAACAGCAGAAGTTGTCGATGCTCTTCAAGAAGGTAATGAGCTTCCTGTGGAGCTCATACAGACATTGTTGAAAATGGCACCTACAGCAGAAGAGGAACTGAAGCTTAGGCTATTCACAGGACAACTGACTGAACTAGGCCCGGCAGAGAGGTTTCTCAAAGTGTTGGTTGACATTCCATTCGCTTTCAAACGCCTTGAATGTCTCATGTTCATGTTTATCCTTCAAGAAGAGTTCACAAGCATTAAGGACTCCTTTGCCACATTAGACGTTGCATGCAACGAACTAAGAAAAAGCAGGCTATTCCTGAAACTCCTAGAAGCAGTTCTGAAAACCGGGAACCGCATGAACGACGGAACCTACCGCGGAGGCGCACAAGCATTCAAGCTGGACACGCTTCTCAAACTCTCAGACGTGAAAGGAACAGACGGCAAGACAACGCTCTTGCATTTCGTGGTGCAAGAAATCATTCGCTCCGAGGGAATAAGAGCCATGAGAACAGAAGGAGCAAGCAGAAGCGTTTCCAGTGTGGGAACCGACTATTCCGAACAAGTAAGCGAGGAAATCGAGGAACACTACCGCAGCCTCGGACTCCACGTGGTGTCCGGCCTGAGCACCGAGCTCATGGACGTGAGAAAAGCGGCGCTCATCGACGGCGACGCGCTCAGCAGCGCGGTGTTGAAGCTCGGCCACTCCATGGTGAAGACTCAGGAGTTCTTGAACACGGACATGAAGAACATCGAGGAAGGGAGCGAGTTCCGTCAGTGCATTGAGAGGTTCGTGGAGAGGGCAAAGAAGGAGGTGACGTGGCTGGTGGAGGAGGAGAAGAGGATCATGTTGTTGGTTAAGAGCACTGCGGATTACTTCCATGGGAACTCTGGCAAGGACGAAGGGTTGCGTTTGTTTATCGTCGTGCGTGATTTCTTGGTAATATTAGACAAGGTTTGTAAAGAGGTAAGTGACACCACCTTGAAGTTGGCCAAGACTTCTTCCACCGTTAGTAATAGCAAGAAAGAGGCTGCGAATTCGCCTAATGCTCGCAACCAACTGTCATCATCGTCACCGCCACCACCGCAACAGCAACAGAAACAGAAATCCAATCTGCATAGAAAGCTGTTTCCGGCTATTGAGGAGAGGAGAGTGTATGAATCTAGTTCAGACGATGAAGAGGATTTTTAA 2958 0.4699 MELTRPSYAVVYVILLCALAQGGSEGKEGDFSRDGGGLTPSIYVRGIKVESEWKHCRKQLIKKNNDVKVFDLHPQEGSSDIKTVENSIHKETKSLALHMKRKTSDCISTSTTPHAPVSENKGSSRYLLTKHSGSNLGVESGHGRNLLADSPNDKMSPSPSPSGEPPSHSPTPASSPSSPSPSPSPSSPSPSPSSPTTPSSTPSSKTPPSPTPSSPTPTPQGVDLPLPPNMFVPFPPPPPRAPQPPFKNFQPIVQVPAPSPSNDGKKKQTVVLAGTASGIIILVGMFLCCWEARSNRDDRDDRPLLILTSSDYSGGSQKVVRLGDTEKNESGISLEKIPPETPSKVPLKVPSKIPSNVRNWSIRGGHNNALLVEISEGVGQVSEGVGQVSESVGQVSEAVGKVSETVGQVPEPPDEKPAPPPPAIPQPQPPPPPPAGPPPPPAGPPPPSPPPRQPPPPAPPQRPGAPAPPRAPVPPPPRGGAHPPPPPKPMTGQVPLAPKEGSPSENDAPKAKLKPFFWDKVNAKPGQTMVWNEISGGSFVINEEMMESLFGFTAQNKNERKKDLTADTSVQYIQIIDPKKAQNLSILLKALNVTTAEVVDALQEGNELPVELIQTLLKMAPTAEEELKLRLFTGQLTELGPAERFLKVLVDIPFAFKRLECLMFMFILQEEFTSIKDSFATLDVACNELRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRAMRTEGASRSVSSVGTDYSEQVSEEIEEHYRSLGLHVVSGLSTELMDVRKAALIDGDALSSAVLKLGHSMVKTQEFLNTDMKNIEEGSEFRQCIERFVERAKKEVTWLVEEEKRIMLLVKSTADYFHGNSGKDEGLRLFIVVRDFLVILDKVCKEVSDTTLKLAKTSSTVSNSKKEAANSPNARNQLSSSSPPPPQQQQKQKSNLHRKLFPAIEERRVYESSSDDEEDF 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5878g00005 985 MobiDBLite consensus disorder prediction 921 961 - -
Mupr5878g00005 985 PRINTS Proline rich extensin signature 154 175 - -
Mupr5878g00005 985 PRINTS Proline rich extensin signature 177 193 - -
Mupr5878g00005 985 PRINTS Proline rich extensin signature 194 211 - -
Mupr5878g00005 985 PRINTS Proline rich extensin signature 217 242 - -
Mupr5878g00005 985 Pfam Formin Homology 2 Domain 505 904 IPR015425 -
Mupr5878g00005 985 MobiDBLite consensus disorder prediction 412 493 - -
Mupr5878g00005 985 SMART it6_source 503 920 IPR015425 -
Mupr5878g00005 985 MobiDBLite consensus disorder prediction 158 251 - -
Mupr5878g00005 985 Gene3D Formin, FH2 domain 509 943 IPR042201 -
Mupr5878g00005 985 PANTHER FORMIN-RELATED 242 951 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Mupr5878g00005 985 MobiDBLite consensus disorder prediction 104 139 - -
Mupr5878g00005 985 SUPERFAMILY Formin homology 2 domain (FH2 domain) 571 921 - -
Mupr5878g00005 985 MobiDBLite consensus disorder prediction 104 266 - -
Mupr5878g00005 985 MobiDBLite consensus disorder prediction 405 510 - -
Mupr5878g00005 985 MobiDBLite consensus disorder prediction 963 979 - -
Mupr5878g00005 985 MobiDBLite consensus disorder prediction 921 985 - -
Mupr5878g00005 985 ProSiteProfiles Formin homology-2 (FH2) domain profile. 503 931 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5878g00005 Mupr-Chr5878 55122 60350 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5878g00005 416 974 FH2 protein (formin) Gene Family AT5G54650 55.965 8.11e-179 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5878g00005 - - gmx:100780844 729.939