Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5870g00001 ATGGCCTCTTTAACTTTTCTGTTTCTTTCTGTCAAACTACTCATGATGTTATTGTTACCTTCAATTTCGTCTTCAACTGATACCATTAGCGGGTCACAGTCCCTTCCTGATGGCACTACTTTGGTCTCTAAAGATGGAACTTTTGAAATGGGTTTCTTCAGTCCAAGCAATAATAACACCACCACAAACCGCTACCTTGGAATATGGTACAAAAGTATCCCCGTTAGAACCGTTGTTTGGGTTGCCAACCGTGAAAACTCAGTTAAGGATAACTCCAGCAGGTTGAGCATAAGCACACAAGGAAAACTTGTGATCCTCAGCAAGAACAATAGTCTTGTTTGGTCAGCAAACTCAACTGAAAAACCACAAGCTGTGAGTCCAATAGTTCAGCTTTTAGACTCGGGGAACTTAGTAGTAAGAGATGATAAAGACACAGATCCAGAAAACTATTTGTGGCAAAGTTTTGACTACCCTTGTGATACTTTCTTGCCAGGAATGAAGATTGGATGGAACCTTAAGACGGGTCTTAACCGGCGTTTAACAGCGTGGAAGAACTGGGATGACCCTTCTCCAGGGGACTTCATTTGGGGTATGGTGCTTGGTAACACTGCTGAATTGGTTATGTGGAAAGGTTCTAGTGAGTATTATAGGAGTGGCCCTTGGAATGGTGTTAGATTCAGTGGCAAGACTACTCCCATTTTTAACTTACAATTTGAGTCCACTCTTAATGAAATGTTCTACACTTACAACCTTGAGAATAATTCATTGATTACTAGAGTTGTTTTGAACCAATCCCTTTATTCTCGCCAACGCTATAATTGGATTAAAGAGAACCAAACTTGGAGGCTTTATTCATCAGTGCCTAGAGACAATTGTGACTACTACAATCTTTGTGGTCCCTATGGGAATTGTATTGTGAGTGAGTCACCACCTTGCCAGTGTTTAACCGGGTTCAAGCCAAAATCAGTTCAAAATTACGAGGCATTGGATTGGACCGAAGGATGTGTGCTTAGTGAAGCGTTTAGCTTTGGGGTAAAAAACAAAGATGGTTTTAAAAGATTTAGTGGGTTGAAACTGCCAGATACCACAAGGTCTTGGGTTGATGGAAATTTGACACTTGAGGATTGCAAGGCCAAATGCTTGGAAAACTGTTCTTGCACTGCATATGCAAATTTAGATGTCAGGGGTGATGGTAATGGTTGCATCATTTGGTTTGGAGCTTTGCTTGATTTAAGGGTGGCTTCAGTTCCCGGGCAAGATCTATATATTCGAATGGTTGCTTCAGAAACTGGTGTGGTTTTTAATCCTTTGTTGATTTTCCTTTACTTCATCTTTCTGTGTTCATTTTCTTTACTAGTGACTGTTGATGAAAAGGGAGGGCATAAGAAAATAGTAGCAGTGGTGATTCCAGTTATTCTCTTGGTTTTTGTGATTGTTTTCATTTTCTCATATATTTACTGGCGGAAGAGAAAGCTTAGAGAAAACACCTCAGAAGACAAGAAAGAAGAAGGCAGTGAAGAAGACTTAGAGCTTCCTTTCTTTGATTTTGCTACAATAGTTCGTGCCACAAATGACTTCTCAAGTGAGAAGAGGCTTGGTCAAGGTGGTTTTGGGCCTGTGTATAGGGGTACACTAGCAGATGGACAAGAGATTGCAGCCAAGAGGCTTTCAAATAATACTGGACAAGGAATAAGAGAATTCAAAAATGAAGTTATATTGTGTGCCAAACTTCAGCACCGAAATCTTGTTAAGGTTCTTGGCTGTTCCATCCAAGGAGAGGAAAAAGTGCTCATCTATGAATACATGCCTAATAAAAGCCTAGATTCCTTTCTCTTTGGTATGTGCCTCAGCAATGTACTGCTGAACTGGTCTAAGCGCTTTAACATTATATTTGGAATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCTAGATTAAGAATCATCCATAGAGACATGAAAGCAAGTAATATTCTACTAGATAGTGAGTTAAATCCAAAAATTTCAGATTTTGGTGTGGCACGAATGTGTAGTGGAAATCAAACAGAAGGGAGGACAAAAATGGTGGTTGGAACTTATGGCTACATAGCACCAGAATATGCAATTGATGGGCTATTCTCCATAAAATCTGATGTATACAGCTTTGGTGTACTGTTACTGGAGATAGTAAGTGGGAAGAAAAACAGGGGAATTTTCTTTCCAGATCATGGATTCAATCTATTAGGACATGCATGGAGATTGTGGAAGGAGGATACTCCAATGAAATTAGTTGATGCTTCTTTGGGTGACACCTTTACCATATCAGAGGCACTACGCTGCATTCATGTTGGTCTTTTATGTGTGCAATTACATCCAGAGGATAGGCCAAACATGGCATCAGTGATTTTTATGTTGAGCAGTGAAAATACTTTGCCACAACCTAAGGAACCAGGATTCCTTATTGAAAGGATGAAGATTGCCGGAGAATCTTCAAATAGCAATGAAATTAAGACTTCCACTAATGAATTAACTGTGACACTGCTAGAGGCTAGATAG 2535 0.398 MASLTFLFLSVKLLMMLLLPSISSSTDTISGSQSLPDGTTLVSKDGTFEMGFFSPSNNNTTTNRYLGIWYKSIPVRTVVWVANRENSVKDNSSRLSISTQGKLVILSKNNSLVWSANSTEKPQAVSPIVQLLDSGNLVVRDDKDTDPENYLWQSFDYPCDTFLPGMKIGWNLKTGLNRRLTAWKNWDDPSPGDFIWGMVLGNTAELVMWKGSSEYYRSGPWNGVRFSGKTTPIFNLQFESTLNEMFYTYNLENNSLITRVVLNQSLYSRQRYNWIKENQTWRLYSSVPRDNCDYYNLCGPYGNCIVSESPPCQCLTGFKPKSVQNYEALDWTEGCVLSEAFSFGVKNKDGFKRFSGLKLPDTTRSWVDGNLTLEDCKAKCLENCSCTAYANLDVRGDGNGCIIWFGALLDLRVASVPGQDLYIRMVASETGVVFNPLLIFLYFIFLCSFSLLVTVDEKGGHKKIVAVVIPVILLVFVIVFIFSYIYWRKRKLRENTSEDKKEEGSEEDLELPFFDFATIVRATNDFSSEKRLGQGGFGPVYRGTLADGQEIAAKRLSNNTGQGIREFKNEVILCAKLQHRNLVKVLGCSIQGEEKVLIYEYMPNKSLDSFLFGMCLSNVLLNWSKRFNIIFGIARGLLYLHQDSRLRIIHRDMKASNILLDSELNPKISDFGVARMCSGNQTEGRTKMVVGTYGYIAPEYAIDGLFSIKSDVYSFGVLLLEIVSGKKNRGIFFPDHGFNLLGHAWRLWKEDTPMKLVDASLGDTFTISEALRCIHVGLLCVQLHPEDRPNMASVIFMLSSENTLPQPKEPGFLIERMKIAGESSNSNEIKTSTNELTVTLLEAR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5870g00001 844 SMART serkin_6 526 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5870g00001 844 CDD PAN_AP_plant 346 424 - -
Mupr5870g00001 844 Gene3D Hepatocyte Growth Factor 342 416 - -
Mupr5870g00001 844 Pfam PAN-like domain 346 411 IPR003609 -
Mupr5870g00001 844 Gene3D Phosphorylase Kinase; domain 1 487 601 - -
Mupr5870g00001 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 489 601 - -
Mupr5870g00001 844 SMART blect_4 32 158 IPR001480 -
Mupr5870g00001 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Mupr5870g00001 844 Pfam D-mannose binding lectin 77 184 IPR001480 -
Mupr5870g00001 844 Pfam Domain of unknown function (DUF3403) 799 844 IPR021820 GO:0004674
Mupr5870g00001 844 Gene3D Transferase(Phosphotransferase) domain 1 602 809 - -
Mupr5870g00001 844 ProSiteProfiles Protein kinase domain profile. 526 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5870g00001 844 Pfam Protein tyrosine and serine/threonine kinase 528 744 IPR001245 GO:0004672|GO:0006468
Mupr5870g00001 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 155 - -
Mupr5870g00001 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 189 IPR036426 -
Mupr5870g00001 844 PIRSF SRK 1 844 IPR024171 GO:0004674
Mupr5870g00001 844 SUPERFAMILY Protein kinase-like (PK-like) 508 807 IPR011009 -
Mupr5870g00001 844 Gene3D - 21 155 IPR036426 -
Mupr5870g00001 844 ProSiteProfiles PAN/Apple domain profile. 335 426 IPR003609 -
Mupr5870g00001 844 CDD STKc_IRAK 532 798 - -
Mupr5870g00001 844 SMART ntp_6 346 425 IPR003609 -
Mupr5870g00001 844 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 789 - -
Mupr5870g00001 844 ProSiteProfiles Bulb-type lectin domain profile. 26 152 IPR001480 -
Mupr5870g00001 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 602 806 - -
Mupr5870g00001 844 CDD B_lectin 32 158 IPR001480 -
Mupr5870g00001 844 Pfam S-locus glycoprotein domain 216 322 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5870g00001 Mupr-Chr5870 1080 4411 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5870g00001 464 828 Receptor kinase-like Gene Family AT4G23190 49.057 3.30e-123 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr5870g00001 PK_Tyr_Ser-Thr 8.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5870g00001 - - gmx:100790436 1019.61