Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5857g00005 ATGTGTGTGTGTGACGAAATCCTGCACGCAGCCAAAACAAACAAAAATGCTTTCAAGACTCTGATTGCGGCTGAGTACAGTGGCGTCCAAGTTGAATTGGCCCCTAATTTCGAGATGGGTGTCTCTAATAAAACTCCCCAATTCCTCAAAATGAATCCTCTTGGAAAGGTTCCTGTCTTGGAAACGCCCGATGGTCCAATCTTCGAGAGTAATGCTATTGCTCGTTACGTTGCTCGATTGAAGGGTGACAACACTTTGTACCCATCCTCTCCCATTGATAATGCCCGCGTTGATCAGTGGATTGATTTTTCATCCTTGGAGATTGATGCTAATCTTCTCAAATTGTACCTTCCAAGACTTGGATTTGCCCCATACCTTCCTCCAGTTGAGGAGGCTGCAACTGCTGCATTGAAGAGAGCATTCGGTGCCTTGAACACTCACCTTGCCTCCAATACTTACCTGGTTGGCCATTCTGTTACCCTTGCTGACATCATAACCACGTGCATCTTGTACTTGGGTTTCACCCAGCTCTTGGTTAAGAGCTTCACCTCAGAGTTCCCTCATGTTGAGAGATACTTTTGGACCTTGGTTAACCAGCCTAACTTCCGAAAGGTTTTAGGTCAGGTTAAGCAAACTGAAAGTATTCCACCTATTCAACCCATAAAGAAACCTTCTCAGCCTAAGGAATCTAAGCCTAAGGCCAAAGAGGAGCCAAAGAAAGTGGCTAAACCAGAGCCAGAAAAGCCCAAAGAAGAAGCAGAAGAGGAGGCACCCAAGCCCAAGGCCAAGAATCCTCTTGATCTTCTTCCTCCAAGCAAAATGATATTGGATGAGTGGAAAAGACTTTACTCAAACACCAAGACCAACTTCCGCGAGGTTGCAATAAAAGGATTTTGGGACATGTATGATCCCGAAGGATATTCTCTCTGGTTTTGTGATTACAAATACAATGATGAGAATACCGTTTCTTTTGTGACATTGAACAAAGTTGGTGGATTTCTTCAGCGGATGGATCTGGCTCGCAAGTATGCATTTGGAAAGATGCTGATAATTGGAGCACAGGCGCCATTTAAGGTGAAAGGATTGTGGCTTTTCCGTGGGCAAGAGATCCCTCAATTTGTAATTGATGAATGCTATGACATGGAGCTCTACGAGTGGACCAAGGTTGACATCTCTGATGAAACTCAGAAAGAGCGCGTCAATCAAATGATTGAGGATTATGAACCATTTGAGGGAGAGTCTCTTTTAGATGCCAAATGCTTTAAGTAA 1269 0.4413 MCVCDEILHAAKTNKNAFKTLIAAEYSGVQVELAPNFEMGVSNKTPQFLKMNPLGKVPVLETPDGPIFESNAIARYVARLKGDNTLYPSSPIDNARVDQWIDFSSLEIDANLLKLYLPRLGFAPYLPPVEEAATAALKRAFGALNTHLASNTYLVGHSVTLADIITTCILYLGFTQLLVKSFTSEFPHVERYFWTLVNQPNFRKVLGQVKQTESIPPIQPIKKPSQPKESKPKAKEEPKKVAKPEPEKPKEEAEEEAPKPKAKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLIIGAQAPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKVDISDETQKERVNQMIEDYEPFEGESLLDAKCFK 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5857g00005 422 FunFam Elongation factor 1-gamma 1 262 422 - -
Mupr5857g00005 422 SFLD Glutathione Transferase (cytosolic) 8 193 IPR040079 -
Mupr5857g00005 422 CDD GST_C_EF1Bgamma_like 93 213 - -
Mupr5857g00005 422 SUPERFAMILY GST C-terminal domain-like 76 217 IPR036282 -
Mupr5857g00005 422 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 85 IPR004045 -
Mupr5857g00005 422 MobiDBLite consensus disorder prediction 226 262 - -
Mupr5857g00005 422 FunFam Elongation factor 1 gamma 83 219 - -
Mupr5857g00005 422 Pfam Glutathione S-transferase, C-terminal domain 131 200 IPR004046 -
Mupr5857g00005 422 Pfam Glutathione S-transferase, N-terminal domain 14 79 IPR004045 -
Mupr5857g00005 422 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 262 422 IPR001662 GO:0003746|GO:0006414
Mupr5857g00005 422 Pfam Elongation factor 1 gamma, conserved domain 261 369 IPR001662 GO:0003746|GO:0006414
Mupr5857g00005 422 SUPERFAMILY eEF1-gamma domain 263 422 IPR036433 GO:0003746|GO:0006414
Mupr5857g00005 422 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 218 IPR010987 -
Mupr5857g00005 422 SMART EF1G_2 261 369 IPR001662 GO:0003746|GO:0006414
Mupr5857g00005 422 MobiDBLite consensus disorder prediction 216 269 - -
Mupr5857g00005 422 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 262 422 IPR036433 GO:0003746|GO:0006414
Mupr5857g00005 422 Gene3D - 83 216 - -
Mupr5857g00005 422 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 7 422 IPR044628 GO:0004364
Mupr5857g00005 422 FunFam Elongation factor 1B gamma 5 77 - -
Mupr5857g00005 422 Gene3D Glutaredoxin 5 77 - -
Mupr5857g00005 422 CDD GST_N_EF1Bgamma 8 80 - -
Mupr5857g00005 422 SUPERFAMILY Thioredoxin-like 7 88 IPR036249 -
Mupr5857g00005 422 SFLD Main (cytGST) 8 193 - -
Mupr5857g00005 422 Coils Coil 418 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5857g00005 Mupr-Chr5857 17531 19755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5857g00005 7 422 Eukaryotic Initiation Factors Gene Family AT1G57720 74.760 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5857g00005 K03233 - gmx:100787125 704.516