Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5857g00001 ATGGGGTGTATATGCTCCAAAGGAAAATCCACAGATGAATATGTTGCTGAAAACCATGTGAAAGAATTTAAGGGCAATAGATCTCCCAACTCCAATGATGCTACTGCTCGCCTTATATCCAATGGAAATGAGGATGAGGACAAGAATGGCAACGGACAGGGACACAAACCTAGGATATGTAGTGTAACCCGAGGGGAAAGAGGAGCGCAGGTTATTGCTGGTTGGCCTTCTTGGCTCACTGCAGTTGCCGGTGAAGCCATTAGTGGTTGGATACCTCGCACGGCTGACTCCTTTCACAAAGCTCGTGATCTTGAAACTAATAACATTGTTGCATTGAAGAAGGTTCGATTTGCTAATATGGATCCCGAAAGTGTTCGTTTTATGTCAAGAGAAATTATTGTGCTGCGGAGACTTGATCATCCAAATGTCATGAAGCTTCAAGGCATGATTACTTCAAGGCTTTCTGGTAGCTTGTACCTTATTTTTGAATATATGGAGCATGATCTTGCCGGCCTTGCAGCAATACCTGGCATCAATTTTACCCTACCACAGATCAAGTGTTACATGCAACAGCTTCTTTGCGGTCTTGAGCATTGTCACAGTCGTGGTGTTATGCACCGTGACATCAAGGGCTCAAATCTTTTGCTTGACAGTAATGGCAATCTGAAGATTGGTGACTTTGGGCTTGCAACTTTGTTTCAGCCATCTCACCAGCAGCCTTTAACAAGCCGTGTAGTAACCTTGTGGTACCGACCACCTGAACTTTTACTTGGAGCTACAGATTATGGAGTTTCTGTGGATTTGTGGAGTGCTGGATGTATTCTTGCAGAATTGTTTGTTGGGAAGCCTATAATGCCTGGACGAACAGAGGTGGAGCAACTTCATAAAATCTTCAAACTTTGCGGATCTCCTTCTGAAGAATACTGGAAGAAGTCAAAGCTACCACATGCAACAATTTTTAAACCTCAACAACCTTACAAACGTGTTGTTTCTCAGATATTCAAGGATTTTCCTTCATCTGCACTGAGCTTCTTGGATGTCCTTCTTGCCGTAGAACCGACGGATCGAGGAACTGCATCTTTAGCACTTCAGCATGAGTTCTTCACATCAAAGCCACTTCCTTGTGATCCATCAACTTTGCCAAAGTACCCACCGAGTAAGGAGTTTGATGCCAAAATTCGCGAAGAGGAAGCCAGAAGACGAAGAGCAGCAAATAAAGGACATGAACATGAATCAGTTGGGAGAAATTTTAGAGAGTCTAAAGCTGTGCCAATACCTGATGCTAATGCCAAGTTTCAGGCAACTAAGAGACAAGAACAGTGTAATTCTAAGTGTATTACTGAGAAGTACAATCCTGAAAAGCAAGGCTGTTGTGACTTCCCTCGTGAACCTGCAAAGTCAAGAGCATTCAATGTATTCTCTCATTCTGGCCAGTCAATGCATCCAAGTGTATATGGATCCTCACGCAATATGAATTTGAAAGAGGAAGATGTTCTCACTTGCCCTGATCATGACTTTAGACTAAGAAAGTCTGAGTTGAGAAAACAAAGTTCCTATTGGCACGGTAGCACTGCAAAATTGTCAAGACTTTCCAATTCAGTAGCAGTTCGAGGCGATTCACTGCTTGATATGAGTGGAGACTTTAGTGTGAAATCGCAGTGGCCAGAAGATCAGTTTGATATGAAATATAGCCATCTGGCTGATGGTGAGTCCAACCAATTGTTGGATGGAATCAAATCATACAAGAAGGCCTTTCATCCTATTGGGAAGGATGGTGCCAAGGGCTATGCTAACAAAAATGGTGGCATGCACCATTCTGGACCGTTGATGGCTCCAGAGGATAGTCTTGAAGAAATGCTTAAGGAACATCAAAGGCAAATTCAACGGGCTGTCCACAAAGCTCGTTTGGGTAACGACAAGACAAAAAAGGTTGACAGTGAGAATGGCCTAACTGAATCACTATTTCACCACGAGAGAATTCAAAAG 1986 0.431 MGCICSKGKSTDEYVAENHVKEFKGNRSPNSNDATARLISNGNEDEDKNGNGQGHKPRICSVTRGERGAQVIAGWPSWLTAVAGEAISGWIPRTADSFHKARDLETNNIVALKKVRFANMDPESVRFMSREIIVLRRLDHPNVMKLQGMITSRLSGSLYLIFEYMEHDLAGLAAIPGINFTLPQIKCYMQQLLCGLEHCHSRGVMHRDIKGSNLLLDSNGNLKIGDFGLATLFQPSHQQPLTSRVVTLWYRPPELLLGATDYGVSVDLWSAGCILAELFVGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQPYKRVVSQIFKDFPSSALSFLDVLLAVEPTDRGTASLALQHEFFTSKPLPCDPSTLPKYPPSKEFDAKIREEEARRRRAANKGHEHESVGRNFRESKAVPIPDANAKFQATKRQEQCNSKCITEKYNPEKQGCCDFPREPAKSRAFNVFSHSGQSMHPSVYGSSRNMNLKEEDVLTCPDHDFRLRKSELRKQSSYWHGSTAKLSRLSNSVAVRGDSLLDMSGDFSVKSQWPEDQFDMKYSHLADGESNQLLDGIKSYKKAFHPIGKDGAKGYANKNGGMHHSGPLMAPEDSLEEMLKEHQRQIQRAVHKARLGNDKTKKVDSENGLTESLFHHERIQK 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5857g00001 662 CDD STKc_CDK9_like 99 368 - -
Mupr5857g00001 662 MobiDBLite consensus disorder prediction 638 662 - -
Mupr5857g00001 662 Pfam Protein kinase domain 100 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5857g00001 662 PANTHER CELL DIVISION PROTEIN KINASE 95 374 - -
Mupr5857g00001 662 MobiDBLite consensus disorder prediction 23 58 - -
Mupr5857g00001 662 Coils Coil 613 633 - -
Mupr5857g00001 662 Gene3D Transferase(Phosphotransferase) domain 1 172 408 - -
Mupr5857g00001 662 SUPERFAMILY Protein kinase-like (PK-like) 99 376 IPR011009 -
Mupr5857g00001 662 FunFam probable serine/threonine-protein kinase At1g54610 167 408 - -
Mupr5857g00001 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Mupr5857g00001 662 Coils Coil 386 406 - -
Mupr5857g00001 662 SMART serkin_6 99 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5857g00001 662 ProSiteProfiles Protein kinase domain profile. 77 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5857g00001 662 Gene3D Phosphorylase Kinase; domain 1 97 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5857g00001 Mupr-Chr5857 2906 7055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5857g00001 90 406 Core Cell Cycle Gene Families AT5G10270 47.688 2.76e-105 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mupr5857g00001 Pkinase 4.9e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5857g00001 - - gmx:100805055 1060.83