Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5849g00003 ATGTCAACTCCTTCGTCATCATCATCTTCTTCTATTTGGGTGTTGTCCAACATAAAGCTTCAGTTCTTTACCCGCATCAGACGGTTTCTTCAATCCAAAGCAACCAGAAAGCGTTGTGACCCCTCTGATCGATTTGACACAACAAAGGGCAGAGGTGAACACAGCAACAAGGTTGAAAATCTTGAAACAGTTCAAGTTATGGAGAAGCATGAGGAGGAAGAGTCTGCGATCATGTTGCAGAGAACTGTGAAGATGCTTCACTTTGGAAGCTGGGAAGAGAAGGAGGTGGCAGCGAAGGAGATTGAAAAGTTGGCCAAGGAAGATGTTAAGGTTAGAAAGTTGATGACAGAACTTGGGGTGGTGCCGGTGCTGGTATCTATGGCGGCGTCGCCGGTGACTAGCCGCCGGCGTGCAGGGTTGACGGCGTTGATCCACCTAGCTGATGGAACTTACACGAACAAGGCTTTGATAGTGGAGGCAGGAATATTGTCCAAGCTGCCTAAGACAATTGACCTTGTAGATGAATCAACAACAAGTAAATTGGCAGAGTTGCTTTTGTCATTGTCATCTCTAGCAAACACTCAATTTCCTCTTGCTTCATTAGACTTTCTCCCATTACTTAGAAACATTCTTGAGACAGGTTCAAGTTTTGACACTAAATTAAGTTGTTTGGGAGCCATACATAACCTATCAACTGTGTTAGAGAATGCATGCCCTTTGGTTTCAAGTGGGGTGGTCCCTACCCTCTTGGAAGTGTCCTCAGTAAAAGAAATTTCAGAGAAAGCACTTGCCACTCTAGGGAACTTGTCAGTGACTTTGATGGGAAAGAAAGCAATAGAGAACAGCTCAATGGTGCCAGAAACCTTTATTGAGATCTTGTCATGGGAAGACAAACCAAAATGCCAAGAGTTGTCAGTGTATATTTTGATGATTCTAGCACATCAAAGCTCATTGCAAAGAAAGAAAATGGAACAGGCAGGGATTGTTCCTGTACTTCTTGAAGTGGTTCTATTGGGGAGCCCTTTGGCTCAGAAGAGAGCAATGAAACTTTTGCAGTGGTTTAAGGATGAGAGGCAAACTAAGATGGGCCCACATTCTGGTCCACAAACACCAAGATTTGCAATGGGGTCACCCGTGAATCAAAGAGAAGCAAAAGAAGGGAAGAAATTGATGAAGAGTTTGGTGAAACAAAGTTTGCATAGGAATATGGAAACAATAACTCAGAGGGCAAATGCAGCAGGGGAGTCTTCTAAATTTAAGTCTTTGATTATTAGCACAAGTTCCAAGAGTTTGCCTTATTAA 1302 0.4324 MSTPSSSSSSSIWVLSNIKLQFFTRIRRFLQSKATRKRCDPSDRFDTTKGRGEHSNKVENLETVQVMEKHEEEESAIMLQRTVKMLHFGSWEEKEVAAKEIEKLAKEDVKVRKLMTELGVVPVLVSMAASPVTSRRRAGLTALIHLADGTYTNKALIVEAGILSKLPKTIDLVDESTTSKLAELLLSLSSLANTQFPLASLDFLPLLRNILETGSSFDTKLSCLGAIHNLSTVLENACPLVSSGVVPTLLEVSSVKEISEKALATLGNLSVTLMGKKAIENSSMVPETFIEILSWEDKPKCQELSVYILMILAHQSSLQRKKMEQAGIVPVLLEVVLLGSPLAQKRAMKLLQWFKDERQTKMGPHSGPQTPRFAMGSPVNQREAKEGKKLMKSLVKQSLHRNMETITQRANAAGESSKFKSLIISTSSKSLPY 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5849g00003 433 Gene3D - 54 411 IPR011989 -
Mupr5849g00003 433 SUPERFAMILY ARM repeat 83 354 IPR016024 -
Mupr5849g00003 433 SMART arm_5 108 148 IPR000225 GO:0005515
Mupr5849g00003 433 SMART arm_5 150 190 IPR000225 GO:0005515
Mupr5849g00003 433 SMART arm_5 191 232 IPR000225 GO:0005515
Mupr5849g00003 433 SMART arm_5 233 271 IPR000225 GO:0005515
Mupr5849g00003 433 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 11 433 - -
Mupr5849g00003 433 MobiDBLite consensus disorder prediction 360 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5849g00003 Mupr-Chr5849 17412 20264 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5849g00003 66 371 U-box Gene Family AT1G67530 30.091 6.86e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5849g00003 - - gmx:100819002 726.472