Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5835g00001 ATGGCACACCACGAATTTTCCATTGCTCTTGTGACTCTCATTGTTCTCTCTATCAACATGAACCTGCAAGTTGCCACTGCTGACTATGGCGGTTGGCAGAGTGCTCATGCCACTTTCTATGGTGGGGGTGATGCTTCTGGCACTATGGGTGGAGCATGTGGGTATGGAAATTTGTATAGCCAGGGTTATGGAACTGACACTGTGGCTCTAAGCACTGCTTTGTTCAACAATGGCTTAAGCTGTGGGTCTTGCTATGAAATGAGATGTGATGATGACCCAAGATGGTGCAAACCTGGCACTATTACTGTCACTGCTACTAACTTCTGTCCTCCAAACCCTTCTTTGCCTAACAACAATGGTGGTTGGTGCAACCCTCCTCTGTCTCACTTTGATATGGCTGAACCTGCCTTCCTGCAAATTGCTGAATATAGAGCTGGAATTGTGCCTGTGGCCTTCAGAAGTACTAATGAAGTAAAGTATACATTTGGTGATGATGATAGGGTTCCTTGTGTGAAAAAGGGAGGAATAAGGTTCACCATCAATGGGCACTCTTACTTCAACCTAGTTTTGATAACAAATGTGGGTGGAGCTGGGGATGTGAATTCAGTGTCCATAAAAGGGTCAAGAACTGGGTGGCAACCCATGTCAAGGAATTGGGGCCAAAACTGGCAGAGCAACTCCTACCTCAATGGACAATCCCTCTCTTTTCAAGTCACCACCAGTGATGGAAGAACTATCACAAGCAACAACGTGGCACCACCCGATTGGCAGTTTGGCCAAACCTTCCAAGGAGGCCAATTCTAG 804 0.4652 MAHHEFSIALVTLIVLSINMNLQVATADYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTDTVALSTALFNNGLSCGSCYEMRCDDDPRWCKPGTITVTATNFCPPNPSLPNNNGGWCNPPLSHFDMAEPAFLQIAEYRAGIVPVAFRSTNEVKYTFGDDDRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVNSVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTITSNNVAPPDWQFGQTFQGGQF 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5835g00001 267 FunFam Expansin 175 267 - -
Mupr5835g00001 267 CDD DPBB_EXPA_N 31 170 - -
Mupr5835g00001 267 Pfam Lytic transglycolase 67 151 IPR009009 -
Mupr5835g00001 267 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 185 264 IPR007117 -
Mupr5835g00001 267 SUPERFAMILY PHL pollen allergen 172 264 IPR036749 -
Mupr5835g00001 267 SUPERFAMILY Barwin-like endoglucanases 31 193 IPR036908 -
Mupr5835g00001 267 SMART dpbb_1 67 152 IPR007112 -
Mupr5835g00001 267 Pfam Expansin C-terminal domain 176 253 IPR007117 -
Mupr5835g00001 267 Gene3D - 16 156 IPR036908 -
Mupr5835g00001 267 PANTHER EXPANSIN-A15 12 267 IPR002963 GO:0009664
Mupr5835g00001 267 FunFam Expansin 22 157 - -
Mupr5835g00001 267 Gene3D - 174 267 IPR036749 -
Mupr5835g00001 267 PRINTS Expansin/Lol pI family signature 250 264 IPR007118 GO:0005576
Mupr5835g00001 267 PRINTS Expansin/Lol pI family signature 212 226 IPR007118 GO:0005576
Mupr5835g00001 267 PRINTS Expansin/Lol pI family signature 71 89 IPR007118 GO:0005576
Mupr5835g00001 267 PRINTS Expansin/Lol pI family signature 49 67 IPR007118 GO:0005576
Mupr5835g00001 267 PRINTS Expansin/Lol pI family signature 145 161 IPR007118 GO:0005576
Mupr5835g00001 267 PRINTS Expansin/Lol pI family signature 31 46 IPR007118 GO:0005576
Mupr5835g00001 267 PRINTS Expansin signature 120 137 IPR002963 GO:0009664
Mupr5835g00001 267 PRINTS Expansin signature 89 100 IPR002963 GO:0009664
Mupr5835g00001 267 PRINTS Expansin signature 101 111 IPR002963 GO:0009664
Mupr5835g00001 267 PRINTS Expansin signature 137 150 IPR002963 GO:0009664
Mupr5835g00001 267 PRINTS Expansin signature 62 76 IPR002963 GO:0009664
Mupr5835g00001 267 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 50 175 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5835g00001 Mupr-Chr5835 3626 5783 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5835g00001 2 267 Expansin Gene Family AT2G40610 73.034 9.29e-143 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5835g00001 - K20628 gmx:100777044 464.151