Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5826g00001 ATGCTTCATACATTGTACACGTTGTGGGCATTCCCTCAGTCCGGAATGTCTGACACGTGGTGTAAACAAGCGTTACTCATTAACCCATTTAAAAAGAGCCTCACTCGTTTCTTTAAGGCTTTGGTTCTTGCTCTTAATCTGTACTATGCAATTGAGGGTTCATATTGTGTTTGTGACACTAATATGGACGTGGAGGAAGATAGATTAAGTTCAACAGAACCACTTGATTTGGCTGATGAAGCAACTGCAGAAACGAAAACTGTTCCAGAGCAACAAATCTTACAACAACAGCAAAACCTTTTCTCATTAGGTGGGGTTGGTTACATGGATCATACATTTGTTTTCATTCCTGTTCTCTTACCTTCGCAGAAAGAACCTCCCTTGCGTTTGTATTATGGGAATGGCCCAAGAATCCACAGGCAACTGTGTATTGAGTATGGTGTGGCTAATACACGCTGTGAACAATGTGGCAAAGTTGGACAGCTAACTTGCTTTTCATCATCTTTCCGAAAGTGGGCTTTAAGAAGAGTAACTGAAGAACAGCAAAACCAAATATGCCGCATATGTAATTTACGTGGACACATCTATATGGACTGTGATCTTCGTATTATAACTCACAGAAGATTGCCTGAAGTTCCTGCTCCTAAAGAAAAGAGGCCAGTGCATTGTGGATTCTGTGGTGAAGCTGGACATAACCGGCGAACATGTTCAAAAGCTGGACCAAATGGAGCTATATCTAATGTGACACTTGGACAACCTGCCAAATCTGGGGAAACTGTGACTTATGAGGGGCGATTTGAGATCCTATCACTTGCTGGTACTTTGATTCTTGCTGAAAATGATGCTCAGAATCTAGACTCTAGTCTAAGGCTTGAAGCATCCTTTGAATTCTTCTAA 897 0.4147 MLHTLYTLWAFPQSGMSDTWCKQALLINPFKKSLTRFFKALVLALNLYYAIEGSYCVCDTNMDVEEDRLSSTEPLDLADEATAETKTVPEQQILQQQQNLFSLGGVGYMDHTFVFIPVLLPSQKEPPLRLYYGNGPRIHRQLCIEYGVANTRCEQCGKVGQLTCFSSSFRKWALRRVTEEQQNQICRICNLRGHIYMDCDLRIITHRRLPEVPAPKEKRPVHCGFCGEAGHNRRTCSKAGPNGAISNVTLGQPAKSGETVTYEGRFEILSLAGTLILAENDAQNLDSSLRLEASFEFF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5826g00001 298 SUPERFAMILY AF0104/ALDC/Ptd012-like 241 279 - -
Mupr5826g00001 298 CDD DUF296 231 279 IPR005175 -
Mupr5826g00001 298 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 242 283 IPR039605 GO:0003680
Mupr5826g00001 298 Gene3D - 177 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5826g00001 Mupr-Chr5826 2407 12703 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5826g00001 242 283 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 73.810 3.27e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5826g00001 - K09250 gmx:102661142 199.519