Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5818g00001 ATGACTCAGTGCGGTGACCCTGAAAACAATCATCATAGCATCATAGTGGAGGGACGAAAGGATAGCTTAATTAGAACTTGTCCTACGTGTGGCCATCATATCAAATGTCAAGACCAGGGTGGTGGAATTCATGACTTGCCTGGACTTCCTGCTGGAGTGAAGTTTGATCCCACAGATCAAGAGATTCTTGAGCATTTGGAAGCGAAGGTGCGCTCTGATATTCATAAGCTTCATCCGCTAATTGATGAGTTCATTCCTACTCTTGAAGGCGAGAATGGAATCTGTTATACTCATCCAGAGAAGTTGCCAGGAGTTAGCAAAGATGGCCTGATCCGCCATTTCTTTCACCGGCCTTCGAAGGCATACACGACAGGAACAAGGAAAAGGAGAAAGGTGCACTCAGACGAGGATGGAAGCGAGACACGTTGGCACAAAACAGGTAAAACTAGGCCAGTCTACAACAGTGCCAAGTTGAAAGGGTACAAGAAAATCCTTGTACTCTACACAAACTACGGAAAGCAAAGAAAGCCAGAGAAAACAAATTGGGTGATGCACCAATACCACCTTGGCAGTGATGAAGAGGAGAAGGAAGGTGAGTTAGTGGTCTCCAAAGTTTTCTACCAAACACAGCCTAGACAATGTGGTTCCCTTGTCAAAGACTCATCACTTGTTCCTGGGAAACACATGAAGGCTCAAAGTGTGCATGAGGTAATCAACAACAAAAACAACAATGGGTTTGTTGAGTACTACCATTCAAATTTCATTTCATTTGATCAAGGGGGGCAACATAGACCTACCACTACTTCTCAAGTAATTTCCCATTTTCCCGTCCATGAAGGTGCTCCTTTCATTCCTTGA 858 0.4429 MTQCGDPENNHHSIIVEGRKDSLIRTCPTCGHHIKCQDQGGGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSDEDGSETRWHKTGKTRPVYNSAKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKEGELVVSKVFYQTQPRQCGSLVKDSSLVPGKHMKAQSVHEVINNKNNNGFVEYYHSNFISFDQGGQHRPTTTSQVISHFPVHEGAPFIP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5818g00001 285 MobiDBLite consensus disorder prediction 128 147 - -
Mupr5818g00001 285 ProSiteProfiles NAC domain profile. 49 208 IPR003441 GO:0003677|GO:0006355
Mupr5818g00001 285 FunFam NAC domain-containing protein 73 58 212 - -
Mupr5818g00001 285 Pfam No apical meristem (NAM) protein 50 189 IPR003441 GO:0003677|GO:0006355
Mupr5818g00001 285 MobiDBLite consensus disorder prediction 123 147 - -
Mupr5818g00001 285 SUPERFAMILY NAC domain 44 208 IPR036093 GO:0003677|GO:0006355
Mupr5818g00001 285 Gene3D NAC domain 58 212 IPR036093 GO:0003677|GO:0006355
Mupr5818g00001 285 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 23 233 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5818g00001 Mupr-Chr5818 1311 3605 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5818g00001 25 285 NAC Transcription Factor Family AT4G28500 62.633 1.70e-118 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr5818g00001 NAM 1.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5818g00001 - - gmx:100797459 564.688