Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5814g00003 ATGTCCACAATTGCCAAGAGAGATTTGAGTTCTAATGAAGAAGAGAGTGAGCTGAGAAGAGGCCCTTGGACTCTTGAAGAAGATAGCTTACTCATTCACTATATTGCTCGTCATGGTGAAGGTCGTTGGAATATGTTAGCCAAAAGTGCAGGATTGAAGAGGACTGGAAAAAGCTGCAGACTCAGATGGCTGAATTATTTGAAACCAGACATTAAGAGAGGGAACCTCACTCCACAAGAGCAACTCTTGATCCTTGATCTCCACTCCAAGTGGGGTAACAGGTGGTCAAAAATTGCTCAGCATCTGCCAGGAAGAACAGACAATGAGATCAAGAACTATTGGAGAACAAGAGTACAGAAACAGGCACGCCAACTTAACATTGAGTCTGGAAGCAAGAGATTCATTGATGCCGTCAAGTGTTTTTGGATGCCAAGGTTGCTTCAAAAGATGGAACAAAACAACTCTCCAAGCCCTCACCCTTCCATGACAAACATGATGAATTTAGGGAACTCTGGAGAAGCTTCTTCTATGAGTTCAATGTCAAGCGGCTTCAATATTCCTTCCATGTCTTCATCATCATCTCCTCCACAAAGGGAATTTATTATGGATGGTGCAAATCATTTTAGTACTATGGCCAATCCCATCAATCCATCCCCAGATTCCTTCCAAATTTCACAGCTACTTGAACTTTCAGAACACCCCAAAAGTCCTCCAAATATGCTTGAGAACAATGTTTACAGCTATCCAATCCAGGACAATTGCTATATCGATGCCAATAACTATGGCGTGGAAAGCCTAAACATGGATCCCCTTTCAGCAATGGAAACTTATGACTTCCCACAGTTTGATTTTCAGACTGCTGGGAGTGGATGGATGTTAGACAGCACGAGTGATACTACTTTATGGAACATGGATGCTATGTGA 924 0.4242 MSTIAKRDLSSNEEESELRRGPWTLEEDSLLIHYIARHGEGRWNMLAKSAGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSKRFIDAVKCFWMPRLLQKMEQNNSPSPHPSMTNMMNLGNSGEASSMSSMSSGFNIPSMSSSSSPPQREFIMDGANHFSTMANPINPSPDSFQISQLLELSEHPKSPPNMLENNVYSYPIQDNCYIDANNYGVESLNMDPLSAMETYDFPQFDFQTAGSGWMLDSTSDTTLWNMDAM 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5814g00003 307 SMART sant 19 69 IPR001005 -
Mupr5814g00003 307 SMART sant 72 120 IPR001005 -
Mupr5814g00003 307 MobiDBLite consensus disorder prediction 1 20 - -
Mupr5814g00003 307 Pfam Myb-like DNA-binding domain 73 116 IPR001005 -
Mupr5814g00003 307 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Mupr5814g00003 307 Gene3D - 76 118 - -
Mupr5814g00003 307 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 35 44 IPR001345 GO:0003824
Mupr5814g00003 307 CDD SANT 77 116 IPR001005 -
Mupr5814g00003 307 FunFam MYB transcription factor 77 140 - -
Mupr5814g00003 307 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Mupr5814g00003 307 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Mupr5814g00003 307 FunFam Myb transcription factor 20 72 - -
Mupr5814g00003 307 CDD SANT 22 67 IPR001005 -
Mupr5814g00003 307 Gene3D - 17 73 - -
Mupr5814g00003 307 SUPERFAMILY Homeodomain-like 18 114 IPR009057 -
Mupr5814g00003 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
Mupr5814g00003 307 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 14 190 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mupr5814g00003 307 MobiDBLite consensus disorder prediction 172 196 - -
Mupr5814g00003 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 67 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5814g00003 Mupr-Chr5814 39980 41087 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5814g00003 15 157 MYB Transcription Factor Family AT1G68320 81.818 7.02e-86 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr5814g00003 Myb_DNA-binding 3.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5814g00003 K09422 - gmx:100780759 540.036