Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5810g00001 ATGAGTTCACAGCACTTCAACAATGTTGGTGAAGGTTTCAGTGGAGGCATGAGTTTCTTCCCTTCCTCTCTCTTTGTGGGGTCACAAACTTCTCCTTTGTCTATGGGAAATGGGGTAGAGGGTCCAAGGCCTCAGATGGGTCTTCAGATTTTGAGCCCCTCAATGTTTCAGTCCCAGGAGAGCAGGGGAACAAAGAGAGCCAGTGATGAAGGGGTTGAGAACAGCAACTTGTGTTTGAAACTTGGGGATGAAGTGGAAGATAAGGGCTCTGCTTCAGGGAAAAATGGGTACACCAAGCTTTGTGCTAGAGGTCACTGGAGGCCTGCTGAAGATGAAAAGCTTAAGGAGCTTGTTGCTCAGTATGGCCCTCAAAACTGGAACTTGATTGCTGAACATCTAGAAGGAAGATCAGGGAAGAGTTGTAGATTGAGGTGGTTTAATCAGCTAGATCCTAGGATTAACAGAAGGTCTTTCTCTGAGGAAGAAGAGGAGAGGCTTTTGACTGCTCATAAGATGTATGGTAACAAATGGGCTATGATTGCTAGACTCTTTCCTGGGAGGACAGATAATGCAGTGAAGAACCATTGGCATGTGATCATGGCCAGGAGGCAGAGGGAGCAGTCTAGCAATGTTTATAGAAGGAGAAAACCCACTACTAACGTGACCCTTCCAAAGGGTTTCAATTTGACTCTGTCAAACAATGCAGCCAGTGACTCAACTATCTCAAGCATCATTGATGAATCTGCCTCAACTTGCACTAACCCCTCCCTCACTCCCTCTTCACCCAAACTTACTCCTTTTGGACTCTTTGATCAAAGGGGTCCAGCTCAGAATCACCAAGCCTTTGGATCATTAATGGGTGAATGTAGAGAAGGTGGGGTGGCAAGGGGGGATGTAAGTTTTAAGAAATATTTTGGTGGTTGGAAGGCTGAATATGTGGGAAAGCTGAAGGGAGTGGTGGACCAGTCCAATTTTTCCGATGCAAACTCAGAAGTATCAGTATCTGAGTCAGTTGCCACCACCAATAGGTCCAATCTCTCAATTTCTGAGGAGAGTGAAACTGTGGGTGACAAGATTAACAACATGCCATTCATTGATTTTCTCGGAGTAGGAGCTAGCTGA 1122 0.4572 MSSQHFNNVGEGFSGGMSFFPSSLFVGSQTSPLSMGNGVEGPRPQMGLQILSPSMFQSQESRGTKRASDEGVENSNLCLKLGDEVEDKGSASGKNGYTKLCARGHWRPAEDEKLKELVAQYGPQNWNLIAEHLEGRSGKSCRLRWFNQLDPRINRRSFSEEEEERLLTAHKMYGNKWAMIARLFPGRTDNAVKNHWHVIMARRQREQSSNVYRRRKPTTNVTLPKGFNLTLSNNAASDSTISSIIDESASTCTNPSLTPSSPKLTPFGLFDQRGPAQNHQAFGSLMGECREGGVARGDVSFKKYFGGWKAEYVGKLKGVVDQSNFSDANSEVSVSESVATTNRSNLSISEESETVGDKINNMPFIDFLGVGAS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5810g00001 373 CDD SANT 166 197 IPR001005 -
Mupr5810g00001 373 Gene3D - 103 154 - -
Mupr5810g00001 373 SMART sant 154 202 IPR001005 -
Mupr5810g00001 373 SMART sant 102 151 IPR001005 -
Mupr5810g00001 373 FunFam MYB transcription factor 103 154 - -
Mupr5810g00001 373 ProSiteProfiles Myb-like domain profile. 150 200 IPR001005 -
Mupr5810g00001 373 PANTHER MYB PROTEIN-RELATED 103 245 - -
Mupr5810g00001 373 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 150 204 IPR017930 -
Mupr5810g00001 373 Gene3D - 157 216 - -
Mupr5810g00001 373 Pfam Myb-like DNA-binding domain 106 166 - -
Mupr5810g00001 373 SUPERFAMILY Homeodomain-like 103 196 IPR009057 -
Mupr5810g00001 373 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 103 149 IPR017930 -
Mupr5810g00001 373 CDD SANT 106 147 IPR001005 -
Mupr5810g00001 373 ProSiteProfiles Myb-like domain profile. 103 149 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5810g00001 Mupr-Chr5810 5263 6904 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5810g00001 102 372 MYB Transcription Factor Family AT1G69560 47.253 1.70e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr5810g00001 Myb_DNA-bind_6 2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5810g00001 K09422 - gmx:100791795 502.286