Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5808g00001 ATGGAGAATTATTCCATGCTGTTCCCTTGTCCCAACTCTTCGAGCTACCCGATTTCAACGAGCGGTGTGGGAAGCTCTCAGCATGGTTTTGGTGGTCAAAGCTCGAAGTCATTTCTCGGTCCAAGGCCTAGTAACGAAGGTTCTAGTGATCGTGAGAAGAGAGAAGGTGGTGGAGATGGCATGTTAATGTCTCAGATCAGTGGTGGCATTAGTGTGAGTGACGAGTTAGGTGGTTCGGGACATGGTAAAAAGAAAGGGGAGAAAAAGGTTAGAAAGCCTAGGTATGCTTTTCAAACGAGGAGCCAGGTTGATATACTCGATGATGGTTATCGATGGAGGAAGTATGGCCAAAAAGCTGTTAAAAACAACAAGTTTCCAAGGAGCTACTACCGGTGCACGCATCAAGGGTGCAATGTGAAGAAGCAAGTTCAACGCCTAACCAAAGACGAAGGGGTAGTGGTGACCACTTATGAGGGAGTGCACACTCACCCAATTGAGAAGACAACAGAAAACTTTGAGCACATTTTGAGTCAGATGCAAATATACACTCCCTTTTGA 558 0.4588 MENYSMLFPCPNSSSYPISTSGVGSSQHGFGGQSSKSFLGPRPSNEGSSDREKREGGGDGMLMSQISGGISVSDELGGSGHGKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTENFEHILSQMQIYTPF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5808g00001 185 Pfam WRKY DNA -binding domain 107 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr5808g00001 185 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 43 168 IPR044810 GO:0003700
Mupr5808g00001 185 SMART WRKY_cls 106 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr5808g00001 185 MobiDBLite consensus disorder prediction 1 92 - -
Mupr5808g00001 185 MobiDBLite consensus disorder prediction 1 44 - -
Mupr5808g00001 185 ProSiteProfiles WRKY domain profile. 101 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr5808g00001 185 FunFam WRKY transcription factor 57 92 166 - -
Mupr5808g00001 185 Gene3D WRKY domain 91 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr5808g00001 185 SUPERFAMILY WRKY DNA-binding domain 98 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5808g00001 Mupr-Chr5808 13278 15533 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5808g00001 94 185 WRKY Transcription Factor Family AT5G13080 89.130 2.52e-59 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr5808g00001 WRKY 1.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5808g00001 - - pvu:PHAVU_001G088200g 311.997