Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5803g00015 ATGCCAAACTTGCATGGAAGTCTTCTATGTCTGTCTTTTCTCCTTCTATGTATATGGGGAAGACCCATCATGGCCATACCAATACCAATACCAATACCAATAGGGGTAGTTCTTGATTTGAACTCCTCAATTGGAAGTATATCTAATAGCTGCATATGGATGGCATACCAGGATTTCTACGAACGCCATTCTCATTACAAAACCAGACTTTCCCTTCAAACCCGAGATTCTGGGCAAAATGTTGTCACAGCAGCATCCATAGCTCAAGAATTGTTAAATAAGAAGGTGCATGCAATCATTGGACCACAAACATCAGAACAAGCTTGGTTTATTATAGAACTTGGAAGCAAAACTAAAGTGCCCGTAATCTCGTATACTGCCACAAGTCCGTCCCTTTCCCCAACCCGAAAGCCTTATTTCATTCGCACAGCCCGGGATGATTCCTCTCAGGTGGAAGCTATAGCTGCCATTGTCAAAGCTTATGGTTGGCGTGAAATCGTCCCCATATATGAAGACACCGAATATGGCAATGCTCTCAACCCATATCTGAACGATGCCTTCGTAAAAATTGGCACTCGTGTGCCTTACCGATGTGTCATTGGTCCACGCTCTGGGGGCATCGAAATTTCGAAGGAGCTCGAGAACCTCAAGGGAATGGCAACTAAAGTGTTTCTTGTTCATATGAGCACTGAACTTGGGTGTAAGTTGTTTCTGGCTGCAAAGAAAGCAGGGATGATGACAGTGGGGTATGCATGGATGGTTACTGAAGGCCTATCTGCAGAGGAAGACCCTATGGTGGTAAAATGCATGGATTCCATGCAAGGTGTGTTGGGAGTTAGGCCAAGCCTAAATCACTCCAATAGGCTTGACAACTTCAATAAAAGATGGAAGGGGTTATCAGCCATATCAGGTAAAGGAAACGATGACTCCAATGTGTTAAATGTAACCATCTTTGGATTGTGGGCTTATGATACTGTTTGGGCATTAGCCAAGGCAGTGGAGAAAGTTGGGCAGGAAAATACTCTCTCCCAAAGGAAAAATATCTCTACCCTTCTCAAAACAATTCTGGCTACCAAATTCAATGGCCTCTCTGGGAATTTTCACTTGGTTAAAGGACAACTAGAGCCATCAACTCTTGAAGTGTTCAATGTTGTGGACCAAGCAGAGAGGAGTATTGGAAATTGGATGCCAGAGAGAGGGCTTTCTAATTTAAAGCAACCAATATGGCCAGGTAACACAACAGAGCCGCCAGCAAAGTTGAGGATTGGGATCCCAGTTACAAACAGTAACGATGAATTCAAGAAAGTTCTAAACTTCTCTTTTGAAGTGTTTTTTGAAGCCGTGAAGGTTTTACCCTTTTCCCTGCATTATGAACTCTTTCCTTTCGAGAAACATGGAAAAAGTGCTTGGACTTATGACGAACTTCTCATGCAAATTAAGAAAAAGGCAAGTTTTCTTTTTCTTTCTTTTTCACATAGGTATGATGTTGTGGTTGGGGACGTGACAATTGTGGCTGACCGCTCAATGTATGTTGATTTTACAATGCCATTTTTAGAATCAGGCGTGGCAATGTTGGTTTTGGCGAAGCACGATGAGAGGCAAAACATTTGGATTTTTCTGAAGCCATTTAGTTGGGACCTTTGGTTGACGACTGGTGCAGCCTTCATCTTCACAGGTTTCATCGTTTGGTTTATTGAGCATCGCTCAAACTCAGAGTTCAGGGGCACTCCAAAGAACCAACTTGGCATGGTTCTCTGGTTTTCTTTCTCAACACTCGTCTTTGCTCAAAGGGAGAGGATAGTGAACAATTGGTCACGATTTATTCTAATTATATGGTTCTTTCTGGTACTCATCATAACGCAAAGTTACACTGCAAGTTTAGCTTCAATTCTGACCGTACAGAAACTGCAGCCGGAGTTTGTTGACGCAGAAGAGATCAAAAGAAATAATTACTTTGTGGGATATCATCAGCGTTCCTTTGTGAGAGAACTACTAATAGAAAAGTTAGGATTCAATGAATCCAAGTTAAAGGGTTACGACGGCCCTAAGGCCTTTCAAGAAGCTCTGTCCCTTGGAAGCAACAATGGAGGAGTCGCTGCTATTTTTGATGAAATTGTCTTTATTAACATCTTCCTCATGAAATATGGCTGCAAAAAGTATCAGATGGCATTCCCACAAAACTCTCCATTGGTCCCTTACTTGTCGAGGGCAATAATAAATGTCATTGAAAATAAAACAACATTTGATGGGATTAAGAAGAAGTACTTCTCAAACGACGTGATAAGTGAAGATGTAAGTACCTCAATGGCATTTGGAAGCCCAAACTTAACTTTAAAGAGCTTTGGGGGGCTTTTCATCATCACATTGTTCAGTTCATTGCTTCCACTCACTGTCCATTTGTTTAAATTCATACATTCAAAATGGACCGTTCAAAATTTTCAAAGATCCCTTTCGAAGATGATCACTGAATTGGCAAAGCATTTCAAAGAAGAGTGCTCTTTACATCCTCCTCCAAATAGTCCGGAAACGGAGGAAGGTTCACTTGATTCCGATGGCACCCGTGATCAATCAATAATTCAAAACGAGGAAGATCTAAGA 2598 0.4165 MPNLHGSLLCLSFLLLCIWGRPIMAIPIPIPIPIGVVLDLNSSIGSISNSCIWMAYQDFYERHSHYKTRLSLQTRDSGQNVVTAASIAQELLNKKVHAIIGPQTSEQAWFIIELGSKTKVPVISYTATSPSLSPTRKPYFIRTARDDSSQVEAIAAIVKAYGWREIVPIYEDTEYGNALNPYLNDAFVKIGTRVPYRCVIGPRSGGIEISKELENLKGMATKVFLVHMSTELGCKLFLAAKKAGMMTVGYAWMVTEGLSAEEDPMVVKCMDSMQGVLGVRPSLNHSNRLDNFNKRWKGLSAISGKGNDDSNVLNVTIFGLWAYDTVWALAKAVEKVGQENTLSQRKNISTLLKTILATKFNGLSGNFHLVKGQLEPSTLEVFNVVDQAERSIGNWMPERGLSNLKQPIWPGNTTEPPAKLRIGIPVTNSNDEFKKVLNFSFEVFFEAVKVLPFSLHYELFPFEKHGKSAWTYDELLMQIKKKASFLFLSFSHRYDVVVGDVTIVADRSMYVDFTMPFLESGVAMLVLAKHDERQNIWIFLKPFSWDLWLTTGAAFIFTGFIVWFIEHRSNSEFRGTPKNQLGMVLWFSFSTLVFAQRERIVNNWSRFILIIWFFLVLIITQSYTASLASILTVQKLQPEFVDAEEIKRNNYFVGYHQRSFVRELLIEKLGFNESKLKGYDGPKAFQEALSLGSNNGGVAAIFDEIVFINIFLMKYGCKKYQMAFPQNSPLVPYLSRAIINVIENKTTFDGIKKKYFSNDVISEDVSTSMAFGSPNLTLKSFGGLFIITLFSSLLPLTVHLFKFIHSKWTVQNFQRSLSKMITELAKHFKEECSLHPPPNSPETEEGSLDSDGTRDQSIIQNEEDLR 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5803g00015 866 SUPERFAMILY Periplasmic binding protein-like II 419 759 - -
Mupr5803g00015 866 PIRSF IGluLR_plant 3 864 IPR017103 -
Mupr5803g00015 866 MobiDBLite consensus disorder prediction 831 866 - -
Mupr5803g00015 866 SMART GluR_14 419 758 IPR001320 GO:0015276|GO:0016020
Mupr5803g00015 866 Gene3D - 420 536 - -
Mupr5803g00015 866 CDD PBP1_GABAb_receptor_plant 35 403 IPR044440 -
Mupr5803g00015 866 Gene3D - 319 419 - -
Mupr5803g00015 866 Pfam Ligand-gated ion channel 544 790 IPR001320 GO:0015276|GO:0016020
Mupr5803g00015 866 Gene3D - 537 665 - -
Mupr5803g00015 866 FunFam Glutamate receptor 146 303 - -
Mupr5803g00015 866 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 34 807 IPR015683 -
Mupr5803g00015 866 SUPERFAMILY Periplasmic binding protein-like I 31 411 IPR028082 -
Mupr5803g00015 866 MobiDBLite consensus disorder prediction 847 866 - -
Mupr5803g00015 866 Pfam Receptor family ligand binding region 54 385 IPR001828 -
Mupr5803g00015 866 Gene3D - 153 309 - -
Mupr5803g00015 866 FunFam Glutamate receptor 536 666 - -
Mupr5803g00015 866 Gene3D - 53 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5803g00015 Mupr-Chr5803 55122 58445 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5803g00015 32 831 Ion Channels AT2G29120 38.895 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5803g00015 K05387 - gmx:100800495 1296.95