Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5803g00006 ATGGAAGAGGAAGAAGAGACGCAGCACCACCGAGTCACTGATTCGTCCCTCACCGCCGAGTCACTCGCTTCCACTCCTTCCGATGAAGCGCCACCCAACTCGGAAACCCTAGTTCTCTACTCTTCTTCGTTTCCCCACCATCACGCTGCTTATATGCAGGGAAGCATTACTGCACGTAAGGGTGGCAAAGCTGAGAATAAGGAGTCAGCTCGGCCTCCTGACAAGGAAACTATTGTAAAAGATGCAGTTGAGGCACCTCAAAAACAGACAGAGAATCAACTTCAGGTGTCTGTATGTTCAACTTCATTATCTGAACTATCACCAACTTCTGTTTCACAGTCTTTATCATCTGCCCCTAGTCCAACTGTACCAGAACAGAGATTGTCTCCTCCTAAGGCTAATAGTGTACAAGTGCTGAAAGTAGACAATAGAACTCCTTCTGGTGGTACAACCTTATCTTCTGTTTCTGTTGCAAGGGAATCTGCATCTGATGGATACAACTGGCGGAAGTACGGTCAGAAGCAAGTGAAGAGTCCTATGGGTTCTCGAAGCTATTACAGGTGTACCCATTCAAATTGTTGTGCTAAGAAGATTAAATTTTGTGACCACTCAGGACATGTGATAGAGATTGTTTATAAAAGTCAACATAGTCATGATCCCCCGCATAAAATTGAGTCACCCAAGGAAAGTGAGTTGCTTCCTTCCTGTAAACCTAAAGTAGAAAGCAGTGTTCCAAAGCAATCTATCAGGGTTCTGACTGATTCTGATCCGTCATCTTCTCCAAAAGAATCTTTACAAGAAGCACCTTGCAGTACTGATAAGAATCTAGAAAACTCATCTAATGGTGAGAATGGTAAAGTTATTTTGAAGGAAGAGCATGTTACTGACCCAGAGCCAAAAAGAAGGCAAGTTGCATGTGAATTCATTTTCTTCACAGGAAATAATTTAAAGAATAAGTATTTTTTTCTAATTGTGGCTGGACCCAATGGTCTAATATTGAACAAAGGTGACTTAACATGCTTGGATTCAGCAGTAAAACCTGGAAAGAAACCAAAGTTTGTTGTACATGCGGCAGAGGATGTGGGGATATCAGGTGATGGATACCGATGGCGCAAGTATGGACAAAAATTGGTGAAGGGAAATCCACATTTCAGGATCAAGGAATGCTTATTAATGCTTGCTTGCATGTCCCCTTTTAATATTCTAAGAATGCTGTATCCTTTATGGAAGCGTGTCTCCATAAAAGTCGGACTAATTGGATCTTCAAGAGAATGCAGATGGGACATCACTGTAAATGTCATTCCTTTCTGTTGCACATCTTCTAGTTACAAAGAATTACAAGTTGATGACAGCAAGTTGAGAACTCAGTCGAAAGATAATTTGAAGATAACCAAACAAGCCCTTATGACATTGTAA 1416 0.4145 MEEEEETQHHRVTDSSLTAESLASTPSDEAPPNSETLVLYSSSFPHHHAAYMQGSITARKGGKAENKESARPPDKETIVKDAVEAPQKQTENQLQVSVCSTSLSELSPTSVSQSLSSAPSPTVPEQRLSPPKANSVQVLKVDNRTPSGGTTLSSVSVARESASDGYNWRKYGQKQVKSPMGSRSYYRCTHSNCCAKKIKFCDHSGHVIEIVYKSQHSHDPPHKIESPKESELLPSCKPKVESSVPKQSIRVLTDSDPSSSPKESLQEAPCSTDKNLENSSNGENGKVILKEEHVTDPEPKRRQVACEFIFFTGNNLKNKYFFLIVAGPNGLILNKGDLTCLDSAVKPGKKPKFVVHAAEDVGISGDGYRWRKYGQKLVKGNPHFRIKECLLMLACMSPFNILRMLYPLWKRVSIKVGLIGSSRECRWDITVNVIPFCCTSSSYKELQVDDSKLRTQSKDNLKITKQALMTL 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5803g00006 471 MobiDBLite consensus disorder prediction 214 235 - -
Mupr5803g00006 471 MobiDBLite consensus disorder prediction 214 294 - -
Mupr5803g00006 471 MobiDBLite consensus disorder prediction 14 41 - -
Mupr5803g00006 471 MobiDBLite consensus disorder prediction 61 82 - -
Mupr5803g00006 471 ProSiteProfiles WRKY domain profile. 157 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr5803g00006 471 SUPERFAMILY WRKY DNA-binding domain 160 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr5803g00006 471 MobiDBLite consensus disorder prediction 1 96 - -
Mupr5803g00006 471 MobiDBLite consensus disorder prediction 246 285 - -
Mupr5803g00006 471 SUPERFAMILY WRKY DNA-binding domain 359 385 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr5803g00006 471 Gene3D WRKY domain 352 398 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr5803g00006 471 MobiDBLite consensus disorder prediction 110 155 - -
Mupr5803g00006 471 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 99 385 IPR044810 GO:0003700
Mupr5803g00006 471 SMART WRKY_cls 162 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr5803g00006 471 SMART WRKY_cls 364 408 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr5803g00006 471 ProSiteProfiles WRKY domain profile. 359 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr5803g00006 471 Gene3D WRKY domain 149 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr5803g00006 471 Pfam WRKY DNA -binding domain 164 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr5803g00006 471 Pfam WRKY DNA -binding domain 366 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5803g00006 Mupr-Chr5803 25373 29055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5803g00006 75 385 WRKY Transcription Factor Family AT4G30935 41.538 1.86e-57 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr5803g00006 WRKY 2.8e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5803g00006 - - gmx:100127388 523.472