LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr5796g00001	ATGAGGTTCAACAGTATCATCTCCTTAACACTCACCCTTCTCTTCCTCTCTATACACCTCCATGCGTACACACCGGTGGACAACTTCACAATCAGTTGCGGCACCACCGGGAAATCTTTCGACGGCGAAAGGACATGGACGGGAGATAGAGATTCAAAGTTCTTATCCGGTCAAGATGGCACCGTTTATGCTGATGCAATAACACAACCTTCTTCTACAAATCAAGTTCCCTACATCGCAGCACGCTTATCTCGTTCCCAATTTAACTACTCCTTTCCCGTCTCCGCGGGCCCCAAATTCCTTCGCCTCTTCTTCTATCCTGCTTCCTACCCTTCCTTTCCCCGCACACAAGCATCCTTCACCGTTCAATCCAACCAATTCACGCTCCTCCACGCTTTCAACACCTCTTTAAACGCCGACGTGGAAAACATGGAAACCATCTTCAGAGAATACGTGGTCAACGTGAACGAAGGTGAGAGGCTGAACCTTGTCTTCACTCCGTCGCAACCAAACTCCTACGCTTTCGTCAACGGAATCAAGGTCTTTTCCATGCCAGACTATCTCTATTACACGGCAGCAAATGACACGGGATTCACACATGTGGGATACGACACGCTATACAGCGTCGCAAGCAGCGCTGCGCTGGAGACAGAGTACAGAATCAAAGTCGGAGGCCAAGCAATCTCGGCACGAGACGACACCGGTTTGTTCAGGAACTGGGTTGGTCATGATGAAGAGTATTTAATTAGACAAAATCCACAGAATAATGATCTACCAGCTGACTTGGATGGTAACGTGAGCATAACCGTGAATCCTGATTACGTGGCACCCAAGCAACTGTACAGAACAGCGCGTGTCATGGGCACCAACGGAACTCTGAATAAAATTGTAAACCTGACTTGGGAGTTCCCCGTTGATCCTGGCTTCACTTACGTGGTGAGGCTCCACTTTTGCGAACTTGACCCAAATATTACTAACGTCGGTGACAGGGTGTTCATCATTTACATAGCGAGCCAGGTGGCTGAGAACAAAGCTGATGTTATGAAATGGACCCTGGGACAGAAAGGTCTCGCTGTACACAAAGACTACGCGGTTTTAATTCCTAATAATTATAATCAGAAAAAGGTTAATCTCTCCCTTCAGCTGCATCCTTATGATAAGACGAAATACAGAGACCCGTTCTTGAACGGTGTCGAGATCTTCAAAATCATTGATGGGTCTAACAACCTCGCCAGACCTAATCCAGACCCGCTTCAGACTCCGCAGAGCACCATACCCGACCAAAAGGGCAAAAGCAGCAGCGGAAGCCGAACGACGATAATTGGTGTCGTTGCGGGGGTTGTATCCGTTGTCGTTTTCTTCGTTGTACTTTTGCGATGCAAGAGAACCAATAAAATGAATACCACGGCTTACAGATCCAAGTCAACCGCCAGGCAGAACACATCGCTTCCGTCCGATCTATGCCGCCGCTTCTCTCTTGTCGAGATCAAATCCGCCACCAAGAACTTCGACAACGTCTTCATCATCGGTGTTGGGGGATTCGGCCACGTGTACAAGGGCTACATCGATGGCGATTCCACTCCTGTGGCCATTAAGCGCCTAAAACCGGATTCGCAGCAGGGTGCACGCGAGTTCCTGAATGAGATCGAGAAGCTCTCGCAGCTCCGCCACCTCCATGTTGTCTCTCTCATCGGCTACTGCAACGATAACAAGGAAATGATCCTGGTCTACGATTATATGGCGCGTGGCAACCTCCGTGATCATCTCTACAACTCCGATAAACCCCCTCTCTCGTGGAAGCAACGCTTGAAGATTTGCATTGGCGCCGCACGTGGTCTGCATTATCTTCACACTGGTGCGAAGCAGATGATAATCCACCGCGACGTGAAAACCACCAACATCTTGTTGGATGAAAAATGGGTGGCCAAGGTTTCGGACTTCGGGCTATCCAGAATTGGGCCCACAACAATGGACAAGGCCCATGTCAGCACTGTTGTGAAGGGCAGCTTTGGGTATCTAGACCCAGAGTATTATAAACGTTACCGTTTGACGGAGAAGTCTGACGTGTACTCTTTCGGGGTAGTGCTCTTTGAGATACTCTGCGCTCGCCCGCCTTTGATACGTAACGCGGAAATGCACCAGGTGTCGCTTGCTAATTGGTCCAGGAGCTGTTATCAAAGTGGGACCATGGAGCAGATTGTGGACCCTACTTTGAAGGGCAGGATTGCACCCGAGTGCTTCAAGAAGTTTTGCGAGGTTGGGGTGAGTTGTTTGTTAGAGGATGGAACGCAGAGGCCGTCGATGAACGACGTCGTTTGGGTGTTGGAGTTTGCGCTGCAACTGCAAGAGAGCGCGGAGCAGCGCGAAAATGAGAAAAGAGAGGAAATTAGTGACGAAACGTTTACTAGTGAGTTGAGTGCGACAACGATTAGTGGAGACCATAGCTATAGTTATGAGGATAGTTATAATTCGTTGCGGTGTTGGCCCCCTTCCTCCGAGATTATGGACCTATAG	2514	0.4928	MRFNSIISLTLTLLFLSIHLHAYTPVDNFTISCGTTGKSFDGERTWTGDRDSKFLSGQDGTVYADAITQPSSTNQVPYIAARLSRSQFNYSFPVSAGPKFLRLFFYPASYPSFPRTQASFTVQSNQFTLLHAFNTSLNADVENMETIFREYVVNVNEGERLNLVFTPSQPNSYAFVNGIKVFSMPDYLYYTAANDTGFTHVGYDTLYSVASSAALETEYRIKVGGQAISARDDTGLFRNWVGHDEEYLIRQNPQNNDLPADLDGNVSITVNPDYVAPKQLYRTARVMGTNGTLNKIVNLTWEFPVDPGFTYVVRLHFCELDPNITNVGDRVFIIYIASQVAENKADVMKWTLGQKGLAVHKDYAVLIPNNYNQKKVNLSLQLHPYDKTKYRDPFLNGVEIFKIIDGSNNLARPNPDPLQTPQSTIPDQKGKSSSGSRTTIIGVVAGVVSVVVFFVVLLRCKRTNKMNTTAYRSKSTARQNTSLPSDLCRRFSLVEIKSATKNFDNVFIIGVGGFGHVYKGYIDGDSTPVAIKRLKPDSQQGAREFLNEIEKLSQLRHLHVVSLIGYCNDNKEMILVYDYMARGNLRDHLYNSDKPPLSWKQRLKICIGAARGLHYLHTGAKQMIIHRDVKTTNILLDEKWVAKVSDFGLSRIGPTTMDKAHVSTVVKGSFGYLDPEYYKRYRLTEKSDVYSFGVVLFEILCARPPLIRNAEMHQVSLANWSRSCYQSGTMEQIVDPTLKGRIAPECFKKFCEVGVSCLLEDGTQRPSMNDVVWVLEFALQLQESAEQRENEKREEISDETFTSELSATTISGDHSYSYEDSYNSLRCWPPSSEIMDL	837

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr5796g00001	837	Gene3D	Transferase(Phosphotransferase) domain 1	580	804	-	-
	Mupr5796g00001	837	FunFam	Receptor-like protein kinase FERONIA	580	797	-	-
	Mupr5796g00001	837	MobiDBLite	consensus disorder prediction	412	435	-	-
	Mupr5796g00001	837	FunFam	FERONIA receptor-like kinase	28	185	-	-
	Mupr5796g00001	837	Gene3D	-	28	184	-	-
	Mupr5796g00001	837	Gene3D	-	214	404	-	-
	Mupr5796g00001	837	FunFam	FERONIA receptor-like kinase	213	404	-	-
	Mupr5796g00001	837	CDD	STKc_IRAK	509	776	-	-
	Mupr5796g00001	837	SUPERFAMILY	Protein kinase-like (PK-like)	479	778	IPR011009	-
	Mupr5796g00001	837	ProSitePatterns	Protein kinases ATP-binding region signature.	509	532	IPR017441	GO:0005524
	Mupr5796g00001	837	SMART	serkin_6	503	778	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr5796g00001	837	Gene3D	Phosphorylase Kinase; domain 1	462	579	-	-
	Mupr5796g00001	837	Pfam	Malectin-like domain	31	403	IPR024788	-
	Mupr5796g00001	837	FunFam	receptor-like protein kinase FERONIA	463	579	-	-
	Mupr5796g00001	837	Pfam	Protein tyrosine and serine/threonine kinase	509	772	IPR001245	GO:0004672\|GO:0006468
	Mupr5796g00001	837	PANTHER	OS03G0124300 PROTEIN-RELATED	8	470	IPR046957	GO:0004672
	Mupr5796g00001	837	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	624	636	IPR008271	GO:0004672\|GO:0006468
	Mupr5796g00001	837	Coils	Coil	775	795	-	-
	Mupr5796g00001	837	ProSiteProfiles	Protein kinase domain profile.	503	778	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr5796g00001	Mupr-Chr5796	2433	4946	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr5796g00001	23	787	Receptor kinase-like Gene Family	AT3G51550	50.625	0.0	746

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Mupr5796g00001		Malectin_like	1.7e-40	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr5796g00001	-		-	gmx:100799780	1189.48