Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr578g00003 ATGGAGTGGCATAGAGGCCACGCCATAGGCCACGGCTCATCTGCCACCGTCTCCACCGCCACGTGCCGTGGTGGAGTCTTCGCCGTCAAGTCATCGGAGCTGTCACAATCAGAGCCACTAAAAAAGGAGCAAAGAATTTTATCTTCTCTAAGTAGTCCTTATGTGGTCACATACAAAGGGTGTGACATTACCATGGAGAACAACAACAAGCTCTTGTTCAATCTCTTCATGGAGTACATGCCCTTTGGCACGCTTGCTCAGGCGGCACGCGGTGGCCGGCTCGAGGAGCCCGCCACCGCATACTACATCAGGCAAGTTGTGCAGGGGCTAGAGTACCTGCATTCAAAAGGGTTGGTGCATTGTGACATCAAGGGTGCCAATATCTTAATTGGTGAAGGTGGGGCCAAAATTGGTGACTTTGGATGTGCCAAGAGGGTGGCGGATGAGGCGGCGGCGATCGGCGGCACGCCGATGTTCATGGCGCCGGAGGTGGCACGTGGGGAGGAGCAAGGGTGTGCTAGTGATATTTGGTCACTTGGGTGCACTGTGATTGAAATGGTCACTGGTGGTGCACCATGGCCTAATGTGGCAGACCCTTTTTCAGTTCTTTATCATATTGCATATTCTAGTGAAGTGCCTGAGATTCCTTGTTTTCTATCTGAGGAAGCAAAGGATTTCTTGGGAAAGTGCTTAAGGAGGAATCCACAAGAGAGGTGGACAGCTAGTGAACTTTTGAAGCATCCATTTCTTGGGGGGGTTTGTTACAATAGCAATAAGGAAGTTTTGGAGTCTAATTCAAGTTCCCCAACGAGTGTTCTTGAGCAAGGATTTTGGACTTGTGTGGAAGAGTCAGAAAGTTTTGGCAATTTGATTCCCAACACTAGTTTTGAGATTTCGGCTTCTGGGAGGGTCAGAATGTTGTCTCTGTGTTCAGGGGTGCCCTGTTGGGCACGACATGATGATGATGATGATGAGAATTGGATCACAACGAGAGGGAATGGAGTTGAAGGTTTTGGGAATTGTGGGGTAGGGACAGGTTCTGCTAGTCATGGGGTGTCTCCACAGGAGTTGGTGAAAAGCAATGTCACTGGTAGAAATAGAATTAGTGGGCATGCTTGTCAGGGTCACTAA 1131 0.4943 MEWHRGHAIGHGSSATVSTATCRGGVFAVKSSELSQSEPLKKEQRILSSLSSPYVVTYKGCDITMENNNKLLFNLFMEYMPFGTLAQAARGGRLEEPATAYYIRQVVQGLEYLHSKGLVHCDIKGANILIGEGGAKIGDFGCAKRVADEAAAIGGTPMFMAPEVARGEEQGCASDIWSLGCTVIEMVTGGAPWPNVADPFSVLYHIAYSSEVPEIPCFLSEEAKDFLGKCLRRNPQERWTASELLKHPFLGGVCYNSNKEVLESNSSSPTSVLEQGFWTCVEESESFGNLIPNTSFEISASGRVRMLSLCSGVPCWARHDDDDDENWITTRGNGVEGFGNCGVGTGSASHGVSPQELVKSNVTGRNRISGHACQGH 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr578g00003 376 SUPERFAMILY Protein kinase-like (PK-like) 3 275 IPR011009 -
Mupr578g00003 376 Pfam Protein kinase domain 4 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr578g00003 376 Gene3D Transferase(Phosphotransferase) domain 1 2 293 - -
Mupr578g00003 376 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 296 - -
Mupr578g00003 376 ProSitePatterns Protein kinases ATP-binding region signature. 9 30 IPR017441 GO:0005524
Mupr578g00003 376 SMART serkin_6 3 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr578g00003 376 ProSiteProfiles Protein kinase domain profile. 3 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr578g00003 376 CDD STKc_MAPKKK 2 250 - -
Mupr578g00003 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 118 130 IPR008271 GO:0004672|GO:0006468
Mupr578g00003 376 FunFam Mitogen-activated protein kinase kinase kinase 17 2 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr578g00003 Mupr-Chr578 30680 31810 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr578g00003 1 333 MAP Kinase Kinase Kinase AT1G05100 50.857 4.38e-107 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mupr578g00003 Pkinase 4.1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr578g00003 K20716 - gmx:100819665 589.726