Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5777g00005 ATGGAGACTCTTGCATCCACAAAGAGAAAGGCAAATGCGGTCCCCTCAGTCGTGGTCGAGAAGCAACATCCCAAAAGGCATAGGGTTTCTTTGGCTGAACCTCTCAGTTTATCAAACTTTAAAGAGCAGTTGCAATGTCCTACCAAGCCCAAGGTCAAGAAACCATCTCCCACAAACAACACCCTTCCTTTTCCTCAGGTCGATGAAACTTATGTTTTCGGCATCTACCAGTATCTTCATGCAATGGAGATTCAAGAAAAGAGAAGACCAATTGTTGACTACATGGAGAAGGTTCAGAAAGAAGTTACCCCATTTATGAGAGCAATATTGGTGGATTGGTTAGTAGAGGTAGCTGAGGAGTACCAACTGCACTCCGATACCGTTCATCTCGCTGTTTCATATATTGATAGGTTTTTATCTGTCAATTCTATGAATAAATCGAGGTTTCAGTTGCTGGGTATTTCATCATTATTCATTGCATCTAAGTACGAGGAAGTTGATGTACCGTACCTGGATCAATTCTGTAGCATCACCGATGACACTTCTGATAAGGCAGAGGTTGTAAAAATGGAAGCTGACATATTTAAAACCCTAAAATTTGAAATGGGAAATCCTACCGTAAAGACCTTTCTAAGGAGATTTGCTAGTGTTGCTTCTGAGAACCAAAAAACTCCAAATTTGCAGTTTGAATATTTGGGCAGCTATCTTGGTGAGCTAAGTTTGTTGGAATATGATTGTTTAAGATTCCTGCCTTCTATTGTGGCTGCGTCAGTTATATTTCTTGCCAGATTTATTATCACTCCTGAAGTGCATCCATGGAGTTGTTCCTTGAGGGAATGCTCGGGTTACAAACCAGCTGAGTTGAAAGAATGTGTCCTCATCTTGCATGACTTATATTTGTCAAAAAGGGCAGCCTACTTCCAAGCTGTTCGGGATAAATACAAGCAGCTCAAGTTCCAATATGTGGCAAACCTGCCTTCCCCCAAATGTGTACCAACTGATTACTTTGAAGACCAG 1017 0.412 METLASTKRKANAVPSVVVEKQHPKRHRVSLAEPLSLSNFKEQLQCPTKPKVKKPSPTNNTLPFPQVDETYVFGIYQYLHAMEIQEKRRPIVDYMEKVQKEVTPFMRAILVDWLVEVAEEYQLHSDTVHLAVSYIDRFLSVNSMNKSRFQLLGISSLFIASKYEEVDVPYLDQFCSITDDTSDKAEVVKMEADIFKTLKFEMGNPTVKTFLRRFASVASENQKTPNLQFEYLGSYLGELSLLEYDCLRFLPSIVAASVIFLARFIITPEVHPWSCSLRECSGYKPAELKECVLILHDLYLSKRAAYFQAVRDKYKQLKFQYVANLPSPKCVPTDYFEDQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5777g00005 339 SMART cyclin_7 209 297 IPR013763 -
Mupr5777g00005 339 SMART cyclin_7 112 196 IPR013763 -
Mupr5777g00005 339 SUPERFAMILY Cyclin-like 205 330 IPR036915 -
Mupr5777g00005 339 FunFam G2/mitotic-specific cyclin 90 201 - -
Mupr5777g00005 339 SUPERFAMILY Cyclin-like 69 202 IPR036915 -
Mupr5777g00005 339 Gene3D - 75 324 - -
Mupr5777g00005 339 CDD CYCLIN_AtCycA-like_rpt2 205 319 - -
Mupr5777g00005 339 Pfam Cyclin, C-terminal domain 205 327 IPR004367 -
Mupr5777g00005 339 PIRSF Cyclin_A_B_D_E 2 337 IPR046965 GO:0016538|GO:0044772
Mupr5777g00005 339 Gene3D - 88 203 - -
Mupr5777g00005 339 SMART Cyclin_C_2 205 328 IPR004367 -
Mupr5777g00005 339 FunFam Cyclin superfamily protein, putative 202 274 - -
Mupr5777g00005 339 Pfam Cyclin, N-terminal domain 75 202 IPR006671 -
Mupr5777g00005 339 ProSitePatterns Cyclins signature. 107 138 IPR006671 -
Mupr5777g00005 339 PANTHER CYCLINS 50 320 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5777g00005 Mupr-Chr5777 29750 31435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5777g00005 3 338 Core Cell Cycle Gene Families AT5G43080 52.464 3.51e-118 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5777g00005 K06627 - gmx:100787417 473.781