Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5776g00002 ATGGTTTGGGGCCAAAGAAAGAAAGCGTCTTCAGTGTATGAACAGAATCTCCCCACAACAGCTTTGTTGGGGTACCAGATGGAAGAAGAAGGATTAGGACTAGGAGATTGTTGTTCCTCCAATTTGACGATCACCAGAAAAAGCGAGAAGAGGAAGCACCAAGAGAAGCCATATAGAGGAATAAGGATGAGAAAGTGGGGTAAGTGGGTGGCGGAGATAAGAGAACCCAACAAGAGGTCCAGGATCTGGTTGGGTTCTTACGCCACCCCTGTCGCCGCCGCACGCGCCTACGACACCGCCGTCTTCTGCCTCAGGGGCCCTTCCGCTCGCCTCAACTTCCCCGAATTGCTCTTCCAAGACGACGACGTTTCAACCCAACAAGGCAACATGTCCGCCGATTCAATACGCAAAAAAGCCACCCAAGTCGGCGCCAGAGTCGACGCGCTCCAAACCGCGCTTCAAACTTCATCATCCCACTCTGCTTCCAGCCACGTCACCTCTGAAAAACCAGACTTGAACGAGTATCCAAAACCTGAAGATTAA 543 0.5175 MVWGQRKKASSVYEQNLPTTALLGYQMEEEGLGLGDCCSSNLTITRKSEKRKHQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYATPVAAARAYDTAVFCLRGPSARLNFPELLFQDDDVSTQQGNMSADSIRKKATQVGARVDALQTALQTSSSHSASSHVTSEKPDLNEYPKPED 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5776g00002 180 ProSiteProfiles AP2/ERF domain profile. 57 114 IPR001471 GO:0003700|GO:0006355
Mupr5776g00002 180 SUPERFAMILY DNA-binding domain 57 115 IPR016177 GO:0003677
Mupr5776g00002 180 CDD AP2 58 116 IPR001471 GO:0003700|GO:0006355
Mupr5776g00002 180 PRINTS Ethylene responsive element binding protein signature 96 116 IPR001471 GO:0003700|GO:0006355
Mupr5776g00002 180 PRINTS Ethylene responsive element binding protein signature 58 69 IPR001471 GO:0003700|GO:0006355
Mupr5776g00002 180 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 42 180 - -
Mupr5776g00002 180 SMART rav1_2 57 120 IPR001471 GO:0003700|GO:0006355
Mupr5776g00002 180 MobiDBLite consensus disorder prediction 151 169 - -
Mupr5776g00002 180 MobiDBLite consensus disorder prediction 151 180 - -
Mupr5776g00002 180 FunFam Ethylene-responsive transcription factor 2 56 115 - -
Mupr5776g00002 180 Pfam AP2 domain 58 106 IPR001471 GO:0003700|GO:0006355
Mupr5776g00002 180 Gene3D AP2/ERF domain 57 115 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5776g00002 Mupr-Chr5776 26496 27134 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5776g00002 51 180 AP2-EREBP Transcription Factor Family AT2G23340 57.639 3.37e-50 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr5776g00002 AP2 5.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5776g00002 K09286 - gmx:732579 246.128