Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5775g00003 ATGGAAATGTCTATGGTACAGCAGGTTGTTCCTCGGCAGGAAAACTATGCTCAAAGTCGGGCAACTGCTCTGCACAATGTGGAATCTACTATCACAGAACTTAGTGGGATTTTCACGCATTTGGCTACAATGGTTGCCCATCAAGGGGAGCTTGCTATCAGGATTGATGACAATATGGATGAGTCATTGGCAAATGTTGAAGGAGCTCACAGTTCTTTATTGAGGCATCTCAACCAAATATCATCAAATAGGTGGCTTCTAATAAAGATATTTGCCATTCTGATACTTTTCCTCATGATTTTCATATTCTTTGTCGCCTAA 321 0.4081 MEMSMVQQVVPRQENYAQSRATALHNVESTITELSGIFTHLATMVAHQGELAIRIDDNMDESLANVEGAHSSLLRHLNQISSNRWLLIKIFAILILFLMIFIFFVA 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5775g00003 106 SMART tSNARE_6 9 76 IPR000727 -
Mupr5775g00003 106 SUPERFAMILY t-snare proteins 7 69 IPR010989 GO:0016020|GO:0016192
Mupr5775g00003 106 CDD SNARE_syntaxin5 17 102 - -
Mupr5775g00003 106 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 14 76 IPR000727 -
Mupr5775g00003 106 ProSitePatterns Syntaxin / epimorphin family signature. 20 59 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mupr5775g00003 106 Pfam SNARE domain 51 102 IPR000727 -
Mupr5775g00003 106 PANTHER SYNTAXIN 4 100 IPR045242 -
Mupr5775g00003 106 Gene3D - 5 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5775g00003 Mupr-Chr5775 2664 3624 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5775g00003 1 106 SNARE and Associated Proteins AT5G05760 76.415 7.09e-57 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5775g00003 K08490 - gmx:100777383 164.081