Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5772g00004 ATGGCTTTAGAGCAGGAATTATCGCTGGGTGAGAATAGGAATAGGAATAGAAACCTCGTTGACGGAAACACAAACGGCGTGGAGGGAGGAGATGAGGGAGGGAAAGCGCCGAGACTGCCTCGGTGGACGAGACAAGAGATTCTGGTTTTAATACAGGGAAAGAGAGACGCAGAGAACAAGTTTAGGAGGGGTCGCACAGCGGGATTGGCATTCGGGTCGGGTCAGGTGGAGCCAAAATGGGCATCGGTATCTTCCTACTGCAGAAAGCATGGAGTGAACAGAGGTCCGGTCCAGTGCAGGAAAAGGTGGAGTAATTTGGCCGGAGACTACAAGAAGATCAAAGAATGGGAGACTCAAATAAGGGAGGAGACGGAATCCTTTTGGGTCATGAGAAACGATTTAAGGAGAGAGAGGAAATTGCCCGGATTTTTCGACAAGGAGGTCTATGATATTCTCGATTCAGGCTCGCAGGGGCCCGCGTTGGCTCTCGCTCTTTCATCGCCTTCACCAACCCTTACTAAGGACAAAGACGCCGTTACTAGTACTACCAAAACAACAGTGCCTGACCCCGAGGAGCAGGAGCCTCACCTATATGACAGTAATCGGAGCGCGGCCGGTGAGGATGGTTTGTTCTCAGATTTTGAACAAGATGAACTTCCTCCCAGTCCTGATAAGAAGCCGCCCGACATTCCTGCTCCCATTCCTATCTCAGAGAAGCAATATCAACCACTCCTCCGCGGATGCCAACCTCAAGGTGTGACTAACGAGAAACAGTCTACTTCAAATCCAGAAATGGGTTCTACATCACAAGGAGAGCGGAAAAGGAAGCGGTTAGCAACTGATGGAGAGGAGGAAACTTTGCAATATCAATTAATTGATGTCTTAGAAAGAAATGGCAAGATGCTAAGTGCTCAACTTGAAGCGCAGAATCTAAATTTCCAGTTGGATCGTGAACAGCGGAAAGACCATGCAAGTAATTTGGTTGCTGTGCTTGATAAGCTTGCAGATGCTCTAGGGAGAATCGCTGATAAATTATAG 1038 0.4836 MALEQELSLGENRNRNRNLVDGNTNGVEGGDEGGKAPRLPRWTRQEILVLIQGKRDAENKFRRGRTAGLAFGSGQVEPKWASVSSYCRKHGVNRGPVQCRKRWSNLAGDYKKIKEWETQIREETESFWVMRNDLRRERKLPGFFDKEVYDILDSGSQGPALALALSSPSPTLTKDKDAVTSTTKTTVPDPEEQEPHLYDSNRSAAGEDGLFSDFEQDELPPSPDKKPPDIPAPIPISEKQYQPLLRGCQPQGVTNEKQSTSNPEMGSTSQGERKRKRLATDGEEETLQYQLIDVLERNGKMLSAQLEAQNLNFQLDREQRKDHASNLVAVLDKLADALGRIADKL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5772g00004 345 MobiDBLite consensus disorder prediction 162 235 - -
Mupr5772g00004 345 Gene3D - 42 112 - -
Mupr5772g00004 345 ProSiteProfiles Myb-like domain profile. 41 107 IPR001005 -
Mupr5772g00004 345 MobiDBLite consensus disorder prediction 1 38 - -
Mupr5772g00004 345 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 12 345 - -
Mupr5772g00004 345 Pfam Myb/SANT-like DNA-binding domain 41 130 IPR044822 -
Mupr5772g00004 345 MobiDBLite consensus disorder prediction 162 188 - -
Mupr5772g00004 345 MobiDBLite consensus disorder prediction 249 282 - -
Mupr5772g00004 345 Coils Coil 301 321 - -
Mupr5772g00004 345 MobiDBLite consensus disorder prediction 249 268 - -
Mupr5772g00004 345 CDD GT1 40 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5772g00004 Mupr-Chr5772 19737 23585 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5772g00004 29 138 Trihelix Transcription Factor Family AT1G13450 32.143 5.42e-07 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mupr5772g00004 Myb_DNA-bind_4 1.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5772g00004 - - gmx:100779050 523.087