Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5770g00012 ATGGCTTCCTCGTGTGCTTCCTCTGCTATTGCAGCTGTTGCCATCTCTACCCCAAGGCAAGTTTCTCCACGTGCCCATTACTTGCACATTTCCCAGAAGAATGGATCACTCTTGGGAACCACAAAAGCTTCTTTTCTTAGTGGGAGGAAACTGAAGGCGAACAGTTTTACAGCACCAATTGGAGCACGATCCAGCACTACAGTGTGTGCAGTTGCTGATCCTGACAGGCCTCTTTGGTTCCCAGGCAGCACCCCTCCTCCATGGCTAGATGGCAGTTTGCCAGGAGATTTTGGGTTTGATCCTCTAGGTCTTGCATCTGATCCTGAGAGCCTGAGGTGGAATGTTCAGGCAGAGCTTGTGCACTGCAGATGGGCAATGTTGGGTGCTGCTGGCATTTTCATCCCAGAATTCCTGACAAAGATTGGTGTCCTGAACACCCCCTCATGGTACACTGCTGGAGAGTTGGAGTACTTCACAGACACTACCACACTCTTCATAGTTGAGCTCTTTTTCATTGGGTGGGCTGAGGGTAGAAGGTGGGCTGACATCATCAAGCCAGGCTGTGTCAACACTGACCCCATCTTTCCCAACAACAAGCTCACAGGAACTGATGTTGGGTACCCAGGTGGGCTTTGGTTTGACCCTCTTGGCTGGGGAAGTGGCTCTCCAGAGAAGATCAAGGAGTTGAGAACAAAGGAGATCAAGAATGGGAGGTTGGCCATGTTGGCTGTGATGGGGGCATGGTTCCAGCACATATACACTGGCACTGGTCCTATTGACAACCTCTTTGCTCACCTTGCAGATCCTGGTCATGCTACTATTTTTGCTGCATTCACTCCCAAGTGA 846 0.5059 MASSCASSAIAAVAISTPRQVSPRAHYLHISQKNGSLLGTTKASFLSGRKLKANSFTAPIGARSSTTVCAVADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGELEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5770g00012 281 SUPERFAMILY Chlorophyll a-b binding protein 71 279 - -
Mupr5770g00012 281 Gene3D Chlorophyll a/b binding protein domain 86 271 - -
Mupr5770g00012 281 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 52 279 IPR001344 GO:0009765|GO:0016020
Mupr5770g00012 281 FunFam Chlorophyll a-b binding protein, chloroplastic 86 271 - -
Mupr5770g00012 281 Pfam Chlorophyll A-B binding protein 85 251 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5770g00012 Mupr-Chr5770 114398 116207 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5770g00012 57 281 Chloroplast and Mitochondria Gene Families AT3G61470 88.496 1.65e-149 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5770g00012 K08908 - gmx:100802138 537.339