Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5770g00006 ATGACTACCAACAACAACAACAACGTTGCAGCAGATTTTGGGGACACCACTCTGACCAAGGTTTTTGTTGGGGGCCTAGCGTGGGAGACTCCCAATGACGCCTTCAGAGACCACTTTCGAAAGTACGGTCAGATCCTTGAAGCTGTCATCATTTCCGACAAGCTTAGTGGCAAATCCAAAGGCTATGGCTTCGTGACCTTCAAGGACCCTGAGGCTGCCAAGAAGGCTTGCGAGGACTCCACACCTCTCATTATCAATGGCCGTCGAGCAAACTGCAATCTCGCTTTCCTAGGTGCGCGTCGCACAAGATCTTCTTCCACTTCTTCACCACCACAAGGTACACAAATTCATCTTTTTAGATGCATGCACTGTCACATTATAATCATTTTAATTACTGCATTACTCTTGAATGATTCATTGATAAAATTAAATGAATGGCCGTTTGTGATGCTATTCGCAGGAGGATCAAACGGTGGAGGATTACTGAAGAACAATGTTGTATCAAATACACCAGACAATCACGTGCAACGATATTATCATCCAGCGGGGACAACTGCTTTGCCATTCCATCAACACACCCTTCCTTTCTACGGGTACCCGCCCACCTACATTATGACGGACATGAATTACATTTACAATTACAATCAGAAGCTGTGCTATGGCAGCGGTGGGGCCTACATGAATGGGCACCACTTGTCCCATGTGTACCCGAGGCAGGCTATGGTGGGTGCCAACACATTGATGCCGATGTACCCTGTCTATCAGTATCATCATCCAACGGAGACCATAGGCCTACCTGCTAACAACTTTTATCAAACGCCAGCGTGGCAGACTGGGCCCGTACCAATAGGCATTATGTCCAAGCCCTCCTCTACCATTCCTAACGCAGGTGCGTCACGTCATAACACGTATAACCCAGTCAATGTGTATTTATAA 936 0.469 MTTNNNNNVAADFGDTTLTKVFVGGLAWETPNDAFRDHFRKYGQILEAVIISDKLSGKSKGYGFVTFKDPEAAKKACEDSTPLIINGRRANCNLAFLGARRTRSSSTSSPPQGTQIHLFRCMHCHIIIILITALLLNDSLIKLNEWPFVMLFAGGSNGGGLLKNNVVSNTPDNHVQRYYHPAGTTALPFHQHTLPFYGYPPTYIMTDMNYIYNYNQKLCYGSGGAYMNGHHLSHVYPRQAMVGANTLMPMYPVYQYHHPTETIGLPANNFYQTPAWQTGPVPIGIMSKPSSTIPNAGASRHNTYNPVNVYL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5770g00006 311 SMART rrm1_1 20 93 IPR000504 GO:0003723
Mupr5770g00006 311 SUPERFAMILY RNA-binding domain, RBD 18 182 IPR035979 GO:0003676
Mupr5770g00006 311 Gene3D - 2 110 IPR012677 -
Mupr5770g00006 311 PANTHER BOULE-RELATED 8 286 - -
Mupr5770g00006 311 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 19 109 IPR000504 GO:0003723
Mupr5770g00006 311 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 21 87 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5770g00006 Mupr-Chr5770 54700 56242 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5770g00006 15 95 C2H2 Transcription Factor Family AT2G19380 37.037 3.99e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5770g00006 - - gmx:100813699 353.599