Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5770g00002 ATGGCCAATTTAAATCCTACCTCCCTTGTGATTTCTCTGAACTCAACAAGAGGCACCATGGCTACCATTCTGACCTTCCTCACAGCCATTGCTTTTGTGGCTCAATCATTTCAAAATTACATGATACAGAGGCTGCAAAAACTGTACAAGCATTATGGATATGCTGCTTCAGTGAAGGACAATGAGGAGCATGAGAGTGATTATTGTTCAGTGTGTTTAAGCCATATTTCTAAGGGGGAAAAGGTTCGGTCTCTTCCAGTATGCAACCACAGATACCATGCTGATTGTATTGGTGTTTGGTTGAAGAACCACACCACTTGCCCTCTTTGTAGGAACAACATCACTGATCATGTCCCCCCAAAACATAAACATGTGAAGAACTTTGGAGAAGCTATGTTTAATCTCATGCAGAGTTTCACTGATCTGTTGGTAGCTCTTCTCTACATGCCAGTGCAACCAGGCGTTTAG 468 0.4252 MANLNPTSLVISLNSTRGTMATILTFLTAIAFVAQSFQNYMIQRLQKLYKHYGYAASVKDNEEHESDYCSVCLSHISKGEKVRSLPVCNHRYHADCIGVWLKNHTTCPLCRNNITDHVPPKHKHVKNFGEAMFNLMQSFTDLLVALLYMPVQPGV 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5770g00002 155 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 41 115 IPR044675 -
Mupr5770g00002 155 SUPERFAMILY RING/U-box 58 117 - -
Mupr5770g00002 155 SMART ring_2 69 110 IPR001841 -
Mupr5770g00002 155 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 117 IPR013083 -
Mupr5770g00002 155 Pfam Ring finger domain 68 111 IPR001841 -
Mupr5770g00002 155 ProSiteProfiles Zinc finger RING-type profile. 69 111 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5770g00002 69 114 C3H Transcription Factor Family AT1G53820 56.522 2.27e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5770g00002 - - gmx:100500375 229.565