Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5754g00003 ATGGCAAACGGCGGTAACAGATACGGTGGCCGTAGGGGTGGTCGCCGAAAGGGTGGTGGTGGTCATGAGGGTGATGGTGGTCGTGACCAAAGCGGTGCCGTTGGTGGTCGTGACCAAAGCGGTGCCGTTGGTGGTCGCGGGGGTGGTGGTGGGCATGGAGTTTCCGTTGGCCGTGGCGACCATGGAGTTTCCGTTGGTGGTCGTAAGGGTGGTTGTAGCCGTAGTAGTTCCGTTGGTCGTCGTAAGGGTGGTTGTAGCCGTAGCAGTTCCGTTGGTCGTCGTAAGGGTGGTGGTAGTTATAGCAGTTCCGTTGGTCGTCGTAAGTGTGGTGGTAGCCGTAGCAGTTCTAGTAGTAGTTCTAGTAGTAGCAGTAGCCAACGCAGACGAGGTCCTTCCCAACCAAAAGTAAAACAACGGTGGATACAGAAGTCAAACCTCTCTCCTTCTGAAGGATCTTCAAAACCTAAACAATCTGTCTCTCAGACTCAAGGACAAACTGATCCAGGTATTCAACCGTCACAGTCTCTCTCTCAAACTCAAGGACAAACTGATCCAGGTGTTCAACCATCAGAGTCTCTCTCTCAAACTCAAGGACAAACTGATAAAGGTGCTCAATCATCACGGTCTCTCTCTCAAACTCAAGGACAAACTGATAAAGGTATTCAACCGTCACAATCTCTCTCTCAAACTGAAGGAGAAACTGATCCAGAGCAGAAAGAAGTGAATATCACACCTATGTCCAGGCCTGATAAGGGAGGAAATCTGTCAGAAATAACATACGAACTCGAAGCGAACCATTTCCGCGTTGAAATCAAACCAGAAAACGAAATCATGCACTACCACGTGGACGTGAAGGCCACGACTCCTCCTAAGAACGATCAGCCTCAGAAGATTTCCATGTACCATTTGTCGGTCGTTCGGGAAAGGCTGTTTTCCAATCCCGCGCTTTCTAGTACAATCGACGACGGCAAAAATAACATCTTCAGCACGAAGGAATTGGATAATCTAACCTTCGACATCGACGTGTCCGAAGAAGTGGGCAAAAGAAACGTTTCCTATTTGGTCACTCTGAAACTGGTGAAGGTGCATAAGCTTTGGATATTTAGTGATTACCCCAACGAAAACGTGCGTGCGATTCCCAGGGATATTTTGCAATGCTTTGATTTGGTGTTGAAGGGGAAATCCAAGAAAGAGTACACTGCGGTGGGACGGTTCTTCTGCTTCTTAAAGAACGCTTATCAATGGGGTTTAGACAGTGTAGGCGGGTTTCATCAGAGTCTTAAGCCCACTGCTCAGGGCTTGTCCTTGTGCATCGACTACTACATTCTGTTAACTCCTAAGAAATTATCCGTGATTGAATTTCTGCGACAACAATGTCCACGCATCAATTTGAGGAACTTTGTGAGAAGCAGGAAAGTTATTGAGAAGATACTTGCTGGGTTGAAAGTTACTGTTTCCCACCGGAATACGAAGCAGATATACACTATTGCAGGGTTGACAACCGACATTGTGAGGAACATCACATTCCTTAAGTCGGATCCTAACAGCGACAATCCCCCAAAGCAGACTCGTCTGCTCGATTACTTTTATGGGAATTACCATACGAACACTCTATATGGAAACATTCCCGCCTTGAATCTTGGAGGCAAGAAGACGAATTATGTGCCTATGGAGTTGTGTGTCTTGGTGGAGAATCAAAGATACCCCTCAGAGAGATTGGGCGGAGTTGCTGATCAATATTTGCAAAATCGGACATCGGCTCAAAAAAAGAAAAAGATAATAAAGGAAATAATGCAGTCAGACAAAGGACCGTGCCGGCCTCACAAAATCTCTTTTAACAGAGGTGATATTATTCAACATTTTGGAATGAGTGTCACCAGTTCCATGACAAATGTGATAGGACGTGTAATTAAGCCCCCAGTATTGAAGTTAGTTCAACAAGATGGCAGGACTGGAACTTTTCAGCTGCAAATACCCAAATGGGAATGGCAGCTATCGAGCGCAAAAGTGGCTGTAGGCAAGAAGGTTGAGTATTGGGGCATTCTTGATTTTACCAACGAGAATAAAACAGCTGAAATCATTAGCAACCTTATTCGTAAGTACAGACGACTTGGCGTTGTCATTAATGAGCCAGTTTACCGTGAAAACCCTGATATTGAGAGTCTTTCGGATTGCGATTCGGTGCTTGAATTACTTGAAAATATTAATATTAAGGTTCAAAACACATGTGGACAACGGCTAAAATTTCTTCTTTGTGTGATGGCCAACAAACATCAAGGTTACAAGTTCCTCAAATGGATTGCTGAGACCAAGGTTGGCATAGTGACACAATGCTGCTTGTCTATTAATATTACAACACATTGGGACCAATATCTTTCAAATCTTTTTCTCAAGATCAATGCTAAAATAGGAGGAAGTAATACAGAGCTCAGAAATGGGCTGGGCCCACACTTTAAAGGTAATGGTCATGTTATGTTCATAGGGGCTGATGTCAATCATCCAGCTTCCCGGGACATCAGCATACCATCAATTGCTGCTGTGGTTGCTACTGTTAACTGGCCTGCTGCAAATCGCTATGTAGCACGCATTTATGCTCAAGGTAATCGGGTTGAGAAAATTTCCGATTTTGGGAAAATATGCCATGAGCTTGTTTCTTGTTATAATGAGATGAACAAAGTCTGGCCTGAAAAAATCGTTATCTTTCGTGATGGCGTGAGCGAAAGTCAATTTCACATGGTTCTCACGGAGGAGTTACAAGATTTGAAAGCAGTGTTTCTCGAGTCAAATTATTTCCCAACCATCACTCTTATTGTTGCACAAAAGCGTCATCAAACTCGATTTTTTCCCACGCATGCGACGGATGGAATTCATAATGGCAATATATTACCTGGAACAGTTGTGGACACAAAAGTAGTACATCCTTTTGAATTTGACTTTTACCTTTGTAGTCACTATGGAAACCTGGGTACAAGCAAGCCCACTCACTATCATGTCTTGTGGGATGAGCACAACTTTACCTCTGATAATTTGCAGAAACTCATATTTCACATGTGCTTTACCTTTGCAAGGTGCCTTAAACCTGTATCTTTAGTCCCTCCGGTGTACTATGCTGATCTTGCTGCATATAGAGGACGGTTATACTATGAAGCAAGGAGTCGAAAGCAACCTACAGGTTCAGTTACTTCTTCGTCAATTTCTTCAACAGCCGCAAGATTAAATGATGAGGGGTGTTTTAAGTTGCATGTTGATTTGAAAAATACGATAAATGTTTAA 3273 0.4381 MANGGNRYGGRRGGRRKGGGGHEGDGGRDQSGAVGGRDQSGAVGGRGGGGGHGVSVGRGDHGVSVGGRKGGCSRSSSVGRRKGGCSRSSSVGRRKGGGSYSSSVGRRKCGGSRSSSSSSSSSSSSQRRRGPSQPKVKQRWIQKSNLSPSEGSSKPKQSVSQTQGQTDPGIQPSQSLSQTQGQTDPGVQPSESLSQTQGQTDKGAQSSRSLSQTQGQTDKGIQPSQSLSQTEGETDPEQKEVNITPMSRPDKGGNLSEITYELEANHFRVEIKPENEIMHYHVDVKATTPPKNDQPQKISMYHLSVVRERLFSNPALSSTIDDGKNNIFSTKELDNLTFDIDVSEEVGKRNVSYLVTLKLVKVHKLWIFSDYPNENVRAIPRDILQCFDLVLKGKSKKEYTAVGRFFCFLKNAYQWGLDSVGGFHQSLKPTAQGLSLCIDYYILLTPKKLSVIEFLRQQCPRINLRNFVRSRKVIEKILAGLKVTVSHRNTKQIYTIAGLTTDIVRNITFLKSDPNSDNPPKQTRLLDYFYGNYHTNTLYGNIPALNLGGKKTNYVPMELCVLVENQRYPSERLGGVADQYLQNRTSAQKKKKIIKEIMQSDKGPCRPHKISFNRGDIIQHFGMSVTSSMTNVIGRVIKPPVLKLVQQDGRTGTFQLQIPKWEWQLSSAKVAVGKKVEYWGILDFTNENKTAEIISNLIRKYRRLGVVINEPVYRENPDIESLSDCDSVLELLENINIKVQNTCGQRLKFLLCVMANKHQGYKFLKWIAETKVGIVTQCCLSINITTHWDQYLSNLFLKINAKIGGSNTELRNGLGPHFKGNGHVMFIGADVNHPASRDISIPSIAAVVATVNWPAANRYVARIYAQGNRVEKISDFGKICHELVSCYNEMNKVWPEKIVIFRDGVSESQFHMVLTEELQDLKAVFLESNYFPTITLIVAQKRHQTRFFPTHATDGIHNGNILPGTVVDTKVVHPFEFDFYLCSHYGNLGTSKPTHYHVLWDEHNFTSDNLQKLIFHMCFTFARCLKPVSLVPPVYYADLAAYRGRLYYEARSRKQPTGSVTSSSISSTAARLNDEGCFKLHVDLKNTINV 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5754g00003 1090 ProSiteProfiles Piwi domain profile. 749 1049 IPR003165 GO:0003676
Mupr5754g00003 1090 MobiDBLite consensus disorder prediction 105 232 - -
Mupr5754g00003 1090 Gene3D - 819 1088 IPR036397 GO:0003676
Mupr5754g00003 1090 ProSiteProfiles PAZ domain profile. 478 564 IPR003100 GO:0005515
Mupr5754g00003 1090 Gene3D paz domain 445 568 - -
Mupr5754g00003 1090 Pfam PAZ domain 465 573 IPR003100 GO:0005515
Mupr5754g00003 1090 SUPERFAMILY PAZ domain 447 599 IPR036085 GO:0005515
Mupr5754g00003 1090 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 259 1050 - -
Mupr5754g00003 1090 Pfam N-terminal domain of argonaute 261 391 IPR032474 -
Mupr5754g00003 1090 Gene3D - 668 810 - -
Mupr5754g00003 1090 Pfam Piwi domain 750 1048 IPR003165 GO:0003676
Mupr5754g00003 1090 Pfam Argonaute linker 1 domain 402 440 IPR014811 -
Mupr5754g00003 1090 SMART Piwi_a_2 749 1049 IPR003165 GO:0003676
Mupr5754g00003 1090 CDD PAZ_argonaute_like 450 563 - -
Mupr5754g00003 1090 CDD Piwi_ago-like 617 1048 IPR045246 -
Mupr5754g00003 1090 MobiDBLite consensus disorder prediction 1 254 - -
Mupr5754g00003 1090 SUPERFAMILY Ribonuclease H-like 739 1049 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5754g00003 Mupr-Chr5754 12216 16911 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5754g00003 156 1066 Eukaryotic Initiation Factors Gene Family AT1G48410 33.609 3.80e-131 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5754g00003 K11593 - gmx:100805250 953.74