Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5746g00003 ATGGCATGGATTCAGCATCAAATCCAAACAAAAGATGGTTACATGAGCTACCCACCACCGGTTTTGCATCCACCTTCACCCCCATTTTTGGCTGCATTCCACAAAGAATCAATGTCTTCATCTTCATCATCTGGTGCTAGAATTAGCCCTGCTGTTCTTTTCATCATAGTGATTCTGGCTGTTCTATTTTTCATCTCTGGCCTGCTCCACCTGCTTGTTAGGTTTCTCATAAAGAACCCTTCTTCCTCAGCATCTGCTCAACCCAATAGGCACCAGGAAATTGCAACCTCTGATGCTCTCCAAAGGCAGCTGCAACAGCTTTTCCATCTCCATGACTCAGGTCTGGACCAGGCTTTTATTGATGCACTTCCTGTTTTCCAGTACAAGGAGATAAAGGGGTTGAAGGAGCCATTTGACTGTGCTGTTTGTCTCTGTGAGTTTTCTGAAAAGGATAAGCTCAGGTTGCTCCCTATGTGCAGCCATGCCTTTCACATCAGTTGTATAGACACCTGGCTTTTGTCAAACTCCACATGCCCTCTTTGTAGGGGAAGCCTCCTTACTCCAGGCTTTTCTGCTGAAAATCCAATATTTGATTTTGATGATTTGAGGGATGATGAGGGCTGCCCCTGTAATGGGGAAAATGAATTCACACCTAGGCAGAAAACGGTTGAAATTGAAGAAACTGTGGTAGAGAAGGGGGTTTTCCCTGTGAGACTTGGTAAATTCAGAAGGCTTGATGTGGAGGCCGTGGAGGCTGGAGGAGAGTCTAGTAGCAGAAATTTGGATGCAAGAAGATGTTACTCCATGGGATCTTACCAATATGTGCTTGGCAACTCGGACCTCAGGATAACCTTGAGCCATGACTGGCAAGGTCGTGATACGAAGCTTGCAAAAGGAACGGAAAATTTGGAGAGACTCTCTCTTGAGGGTGATATTGAAGCAAAGAAGATTACAAGTGTCAGTAAAGTGATTGTGGGGATCCATGAAACCTGTGTATTTATGTGGCGGCACCTCTCTCCATCTGTTGAAATTTGA 1035 0.4512 MAWIQHQIQTKDGYMSYPPPVLHPPSPPFLAAFHKESMSSSSSSGARISPAVLFIIVILAVLFFISGLLHLLVRFLIKNPSSSASAQPNRHQEIATSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIKGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHISCIDTWLLSNSTCPLCRGSLLTPGFSAENPIFDFDDLRDDEGCPCNGENEFTPRQKTVEIEETVVEKGVFPVRLGKFRRLDVEAVEAGGESSSRNLDARRCYSMGSYQYVLGNSDLRITLSHDWQGRDTKLAKGTENLERLSLEGDIEAKKITSVSKVIVGIHETCVFMWRHLSPSVEI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5746g00003 344 Pfam Ring finger domain 139 182 IPR001841 -
Mupr5746g00003 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 187 IPR013083 -
Mupr5746g00003 344 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 43 287 - -
Mupr5746g00003 344 CDD RING-H2_EL5-like 139 182 - -
Mupr5746g00003 344 ProSiteProfiles Zinc finger RING-type profile. 140 182 IPR001841 -
Mupr5746g00003 344 SUPERFAMILY RING/U-box 119 188 - -
Mupr5746g00003 344 SMART ring_2 140 181 IPR001841 -
Mupr5746g00003 344 FunFam RING-H2 finger protein ATL46 102 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5746g00003 Mupr-Chr5746 12442 14609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5746g00003 36 276 C3H Transcription Factor Family AT2G18650 45.255 6.20e-57 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5746g00003 - - qsa:O6P43_004596 469.159