Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5739g00004 ATGCCACAAATAATGAGGTTTTCAAGTCTTGTAGTTGTGTTCCTTTTGTGTTTCTCTCCTTTGCTACTTGTCCTTGGTCAGGGAAACTCAGACAGTGAGAGTACTTTGAGAGTGCTTTTGGAAGTGAAGAAGTCTTTTGTGCAAGACCCACAAAATGTTCTGAGTGATTGGTTAGAGGATAACACAAACTACTGCAGTTGGAGAGGGGTGTCATGTGAATTGACCTCAAACTCTTTAGATGGTGACTCGGTGGTGGGACTCAACCTTTCTGACTCGTCACTCACTGGGTCAATATCACCTTCACTCTATCGTTTGCAAAACCTGCTCTACCTTGATCTCTCCTCCAACAGCCTCACGGGTCCCATTCCACCTAATCTCTCCAACCTCACTTCATTGGAATCCCTTCTTCTCTTCTCCAACCAACTCACGGGTCACATTCCCACTGAGTTCGGCTCGCTGACGAGTCTCCGAGTCATGCGACTCGGTGATAATGCACTTACGGGAACGATTCCCGCGTCTCTCGGGAACCTAGTCAACCTGGTCAACCTTGGCTTGGCTTCCTGTGGACTCACCGGGTCGATTCCGAGTCAACTCGGTCAACTCAGTCTCATGGAGAATCTGATTCTGCAGGACAACGATTTGATGGGTCCGATTCCGACCGAGTTGGGGAACTGCTCAAGCCTCACCGTCTTCACTGCAGCTAACAACAAACTCAATGGCTCAATCCCGAGTGAACTGGGTCGACTCAGGAATCTGCAAATTCTCAACTTTGCCAACAACAGTTTGTCAGGGGCGATTCCGAGTCAACTCGGTGACCTGAGTCAACTCGCTTACCTGAACTTCATGGGGAACCAGCTCAAGGGTGCTATTCCACCGTCTCTAGCTCAACTGGGTAATCTTCAAAATCTGGACTTGTCAATGAATAAGCTCGGTGGAGGAATCCCAGAAGAGTTAGGCAACATGGGTCAGCTAGCTTACATGGTTCTGTCCGGTAACAACCTTAATTGTGTCATACCAAGGACCATATGTTCCAATGCAACAAGTTTGGAACACTTGATGTTGTCAGAAAGTGGACTTCATGGTGAGATTCCAGCTGAGTTGAGTCAGTGCCAGCAGCTGAAGCAACTTGATTTGTCCAACAATGCACTCAATGGATCCATACCTCTTGAGCTTTATGGGTTGCTGGGGTTAACTGATCTCTTGCTGAACAATAACAGCTTGGTTGGTTCTATCTCTCCCTTCATAGGGAACCTCACTGGCTTGCAGACACTTGCTCTGTTTCACAACAATTTGCAGGGTGCTCTGCCAAGAGAGATTGGAATGCTGGGCAAGTTGGAAATTTTGTATCTTTATGATAATCAATTGTCAGGGAATATACCTATGGAGATTGGTAATTGTTCTAGCTTGCAAATGGTTGATTTCTTTGGAAACCGTTTCAGTGGAGAAATTCCCATCACTGTTGGAAGGCTGAAAGAGTTGAATTTCCTTCACCTTAGACAGAATGAGCTTGTGGGTGAGATTCCGGCTACCTTGGGTAATTGTCATAAACTGAACATTCTGGATTTGGCTGACAACCAGCTCTCAGGTGCAATTCCTGCAACATTTGGATTCCTCCAGGCATTGCAACAGCTCATGATCTACAACAACTCCCTTGAAGGTAACCTCCCTCACCAACTGATAAATGTAGCAAACTTGACCAGAGTGAACCTTTCGAAGAACAGATTGAATGGTAGTATAGCTGCATTGTGTAGCTCTCAGTCATTTCTTTCTTTCGATGTTACTGACAATGAGTTTGATGGTGAAATTCCTTTCCAAATGGGAAACTCATCCTCCCTTGAGAGGCTAAGATTAGGTAACAATAAATTTTCTGGTGAAATCCCAAGGACATTGGGAAAAATCAGTGAGCTGTCATTGTTAGATCTTTCAGGGAATTCACTCACTGGACAAATACCAGCTGAGCTTTCTTTATCCAACAAACTAGCTTATATTGATTTAAACAGTAATCTTCTTTTTGGACAAATACCATCATGGCTTGGAAGTTTGCCTCAGTTAGGAGAGCTTAAGCTCTCCTCCAATAATTTTTCCGGGCCTCTTCCATTAGGTCTATTCAAATGTTCCAAGTTGTTAGTTCTCTCTCTAAATGACAACTCTCTGAATGGAAGTCTCCCAGCTGATATTGGTGATCTTGCAAACCTTAATGTCCTCAGACTTGACCACAATAAATTTTCTGGGCCAATCCCTCCAGAGATAGGTGAGTTGAGCAAGCTTTATGAGCTCCAGCTCTCCAGAAATAGCTTCAATGGTGAAATGGCAGCTGAGATTGGAAAACTTCAAAATCTCCAAATCATTTTAGACCTCAGTTACAATAATCTCTCAGGTCACATCCCACCTTCTCTTGGGACACTGTCAAAGTTAGAAGCACTTGATCTTTCCCACAATCAACTCATTGGAGAAGTTCCTCCAGAAGTTGGGGAAATGAGCAGCTTGGGAAAGCTTGATCTCTCTTACAACAACCTTCAAGGGAAATTGGATAAGCCGTTCTCCCGCTGGCCAGACGAGGCATTTGAAGGAAACCCACATCTTTGTGGAAGCCCTCTTGAGCACTGCCACCATGATGATGATTCTGGGAGTGCAGGCCTAAATGAGTTGTCAGTAGTGATAATCTCTTCCATTTCAACTTTAGCTGCAATTGCACTTCTGATACTTGCAGTGAGAATCTTCTCCAAAAACAAGCAAAAATTTTGCAGGAAAGGTAGTGAAGTGTATTATGTTTACTCTTCCTCTTCATCACAAGCACAAAGAAGGCCGCTGTTCCAACTAAATGCTGGTGGAAAGAGAGATTTCAGATGGGAAGAAATCATGGATGCCACGAACAATCTAAGTGATGACTTCATGATTGGTTCAGGAGGTTCAGGGAAAATCTACAAAGCTGAATTGGCCACTGGAGAGACAGTAGCCGTCAAGAAAATTTCATCAAAAGATGAATTTCTGTTAAACAAAAGCTTCATAAGAGAAGTTAAGACACTGGGGAGGATTAGGCATAGACATCTGGTGAAGCTAATGGGATATTGTAGCAATAGACACAAAGAAGCAGGTTGGAATCTGTTGATATATGAGTATATGGAGAATGGGAGTGTTTGGGATTGGCTTCATGGGAACCCAGCCAAGGTGAGCAAAGTAAAGAGGAGCCTCGATTGGGAGACAAGGTTCAAAATTGCTGTGGGATTAGCTCAAGGAGTTGAGTACCTCCATCACGATTGTGTTCCAAAGATCATTCACAGGGATATCAAATCCAGCAACATATTGCTAGACTCCAAAATGGAGGCACACTTGGGAGATTTTGGACTGGCAAAGGCAGTGACGGAGAATTATGACTCCAATACTGAGTCTAATTCTTGGTTTGCTGGCTCTTATGGCTACATAGCTCCAGAGTATGCATACTCCCTACAGGCAACAGAAAAAAGTGATGTTTACAGCATGGGAATCGTGCTTATGGAACTCGTTAGTGGTAAAATGCCAACAAATGAAACTTTTGGAGATGAGATGGACATGGTGAGATGGGTAGAGATGCACATTGATATGCATGGGTCAGCCCGTGAGGAATTGATAGATCCTGAGCTGAAACCTCTTTTACCTGGGGAAGAGTTTGCTGCATTCCAAGTGCTTGAGATAGCCTTACAGTGCACGAAAACTACTCCACAGGAGAGGCCATCTTCAAGGAAAGCATGCGATCTTCTCCTCCATGTATTCAACAACAAGATGGTGGACGTTGAGAAGATGAATTTGGATCATTATAAGTGA 3801 0.4401 MPQIMRFSSLVVVFLLCFSPLLLVLGQGNSDSESTLRVLLEVKKSFVQDPQNVLSDWLEDNTNYCSWRGVSCELTSNSLDGDSVVGLNLSDSSLTGSISPSLYRLQNLLYLDLSSNSLTGPIPPNLSNLTSLESLLLFSNQLTGHIPTEFGSLTSLRVMRLGDNALTGTIPASLGNLVNLVNLGLASCGLTGSIPSQLGQLSLMENLILQDNDLMGPIPTELGNCSSLTVFTAANNKLNGSIPSELGRLRNLQILNFANNSLSGAIPSQLGDLSQLAYLNFMGNQLKGAIPPSLAQLGNLQNLDLSMNKLGGGIPEELGNMGQLAYMVLSGNNLNCVIPRTICSNATSLEHLMLSESGLHGEIPAELSQCQQLKQLDLSNNALNGSIPLELYGLLGLTDLLLNNNSLVGSISPFIGNLTGLQTLALFHNNLQGALPREIGMLGKLEILYLYDNQLSGNIPMEIGNCSSLQMVDFFGNRFSGEIPITVGRLKELNFLHLRQNELVGEIPATLGNCHKLNILDLADNQLSGAIPATFGFLQALQQLMIYNNSLEGNLPHQLINVANLTRVNLSKNRLNGSIAALCSSQSFLSFDVTDNEFDGEIPFQMGNSSSLERLRLGNNKFSGEIPRTLGKISELSLLDLSGNSLTGQIPAELSLSNKLAYIDLNSNLLFGQIPSWLGSLPQLGELKLSSNNFSGPLPLGLFKCSKLLVLSLNDNSLNGSLPADIGDLANLNVLRLDHNKFSGPIPPEIGELSKLYELQLSRNSFNGEMAAEIGKLQNLQIILDLSYNNLSGHIPPSLGTLSKLEALDLSHNQLIGEVPPEVGEMSSLGKLDLSYNNLQGKLDKPFSRWPDEAFEGNPHLCGSPLEHCHHDDDSGSAGLNELSVVIISSISTLAAIALLILAVRIFSKNKQKFCRKGSEVYYVYSSSSSQAQRRPLFQLNAGGKRDFRWEEIMDATNNLSDDFMIGSGGSGKIYKAELATGETVAVKKISSKDEFLLNKSFIREVKTLGRIRHRHLVKLMGYCSNRHKEAGWNLLIYEYMENGSVWDWLHGNPAKVSKVKRSLDWETRFKIAVGLAQGVEYLHHDCVPKIIHRDIKSSNILLDSKMEAHLGDFGLAKAVTENYDSNTESNSWFAGSYGYIAPEYAYSLQATEKSDVYSMGIVLMELVSGKMPTNETFGDEMDMVRWVEMHIDMHGSAREELIDPELKPLLPGEEFAAFQVLEIALQCTKTTPQERPSSRKACDLLLHVFNNKMVDVEKMNLDHYK 1266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5739g00004 1266 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 921 1040 - -
Mupr5739g00004 1266 SUPERFAMILY L domain-like 314 669 - -
Mupr5739g00004 1266 Gene3D Transferase(Phosphotransferase) domain 1 1041 1264 - -
Mupr5739g00004 1266 SMART LRR_typ_2 681 705 IPR003591 -
Mupr5739g00004 1266 SMART LRR_typ_2 442 466 IPR003591 -
Mupr5739g00004 1266 SMART LRR_typ_2 105 128 IPR003591 -
Mupr5739g00004 1266 SMART LRR_typ_2 826 857 IPR003591 -
Mupr5739g00004 1266 SMART LRR_typ_2 249 273 IPR003591 -
Mupr5739g00004 1266 SMART LRR_typ_2 153 177 IPR003591 -
Mupr5739g00004 1266 SMART LRR_typ_2 490 514 IPR003591 -
Mupr5739g00004 1266 SMART LRR_typ_2 777 802 IPR003591 -
Mupr5739g00004 1266 SMART LRR_typ_2 633 657 IPR003591 -
Mupr5739g00004 1266 SMART LRR_typ_2 370 394 IPR003591 -
Mupr5739g00004 1266 SMART LRR_typ_2 297 321 IPR003591 -
Mupr5739g00004 1266 SMART LRR_typ_2 729 753 IPR003591 -
Mupr5739g00004 1266 SMART LRR_typ_2 418 441 IPR003591 -
Mupr5739g00004 1266 SMART LRR_typ_2 129 152 IPR003591 -
Mupr5739g00004 1266 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 290 389 - -
Mupr5739g00004 1266 SUPERFAMILY L domain-like 608 868 - -
Mupr5739g00004 1266 Pfam Protein kinase domain 965 1243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5739g00004 1266 ProSiteProfiles Protein kinase domain profile. 960 1251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5739g00004 1266 SUPERFAMILY Protein kinase-like (PK-like) 943 1246 IPR011009 -
Mupr5739g00004 1266 Gene3D Ribonuclease Inhibitor 329 585 IPR032675 -
Mupr5739g00004 1266 SUPERFAMILY L domain-like 36 339 - -
Mupr5739g00004 1266 Gene3D Ribonuclease Inhibitor 150 235 IPR032675 -
Mupr5739g00004 1266 Pfam Leucine rich repeat 516 575 IPR001611 GO:0005515
Mupr5739g00004 1266 Gene3D Ribonuclease Inhibitor 236 327 IPR032675 -
Mupr5739g00004 1266 FunFam Uncharacterized protein 390 483 - -
Mupr5739g00004 1266 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1091 1103 IPR008271 GO:0004672|GO:0006468
Mupr5739g00004 1266 Pfam Leucine rich repeat N-terminal domain 37 72 IPR013210 -
Mupr5739g00004 1266 FunFam Leucine-rich repeat receptor-like protein kinase 1041 1263 - -
Mupr5739g00004 1266 PRINTS Leucine-rich repeat signature 373 386 - -
Mupr5739g00004 1266 PRINTS Leucine-rich repeat signature 802 815 - -
Mupr5739g00004 1266 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 203 274 - -
Mupr5739g00004 1266 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 581 873 - -
Mupr5739g00004 1266 Gene3D Ribonuclease Inhibitor 34 149 IPR032675 -
Mupr5739g00004 1266 Gene3D Ribonuclease Inhibitor 586 654 IPR032675 -
Mupr5739g00004 1266 SMART serkin_6 960 1251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5739g00004 1266 Gene3D Ribonuclease Inhibitor 746 870 IPR032675 -
Mupr5739g00004 1266 Gene3D Phosphorylase Kinase; domain 1 921 1040 - -
Mupr5739g00004 1266 Pfam Leucine Rich Repeat 107 129 IPR001611 GO:0005515
Mupr5739g00004 1266 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 32 198 - -
Mupr5739g00004 1266 Gene3D Ribonuclease Inhibitor 655 745 IPR032675 -
Mupr5739g00004 1266 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 484 580 - -
Mupr5739g00004 1266 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 487 1246 - -
Mupr5739g00004 1266 ProSitePatterns Protein kinases ATP-binding region signature. 966 989 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5739g00004 Mupr-Chr5739 27834 31723 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5739g00004 38 706 Receptor kinase-like Gene Family AT1G17750 37.037 2.51e-102 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr5739g00004 Pkinase 7.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5739g00004 - - gmx:100801889 2180.6