Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5736g00003 TTACAAAATACAAGTTCCAGTGATCAGGCCATAACTCTAATTCCTTCAGGGCTATACCTTAGTGCAAAAGAGGAAGCTCCTCATTTGACTCTTACTTTACCATTTGATTTGCTGGCACCCTCTGCTTCACGGCTTTCCTTGGAGCTGAAAATATGGGAGACAGTGACTTTGGCAGAGAAAGATAATATTTTTGAGTCCTTTATAATGCCAGTTCCACTTGCCCCCTACCCAACACCACCAGCTCCTTATACACCACCAGCTAATGGTGCACAGAGTCAACTAGTCTGTTCTGGGTGTAGAAACCTTCTAGTCTATCCAGTTGGAGCCACCTCTGTGTGTTGTGCTGTTTGCAATGCAGTCACAGCAGTGCCACCTCCTGGCACAGAAATGGCCCAGTTAGTTTGTGGAGGCTGCCATACTTTACTTATGTACATCCGGGGAGCGACAAGTGTGCAATGCTCTTGTTGCCACACGGTCAATCTAGCTTTGGAAGCAAATCAGGTGGCACATGTCAACTGTGGCAACTGCAGGATGCTACTCATGTACCAATATGGAGCAAGATCCGTGAAATGTGCAGTTTGCAATTTTGTAACATCAGTTGGGGTCAGTGCCACAGCAAGCACCACTGAGCAGAAGTTCAGCACCTAA 648 0.466 LQNTSSSDQAITLIPSGLYLSAKEEAPHLTLTLPFDLLAPSASRLSLELKIWETVTLAEKDNIFESFIMPVPLAPYPTPPAPYTPPANGAQSQLVCSGCRNLLVYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGVSATASTTEQKFST 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5736g00003 215 PANTHER PROTEIN LSD1 84 123 IPR040319 -
Mupr5736g00003 215 Pfam LSD1 zinc finger 96 120 IPR005735 -
Mupr5736g00003 215 Pfam LSD1 zinc finger 173 197 IPR005735 -
Mupr5736g00003 215 Pfam LSD1 zinc finger 135 159 IPR005735 -
Mupr5736g00003 215 NCBIfam zinc finger domain, LSD1 subclass 132 161 IPR005735 -
Mupr5736g00003 215 NCBIfam zinc finger domain, LSD1 subclass 93 123 IPR005735 -
Mupr5736g00003 215 NCBIfam zinc finger domain, LSD1 subclass 170 200 IPR005735 -
Mupr5736g00003 215 SUPERFAMILY Multiheme cytochromes 96 194 IPR036280 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5736g00003 Mupr-Chr5736 13597 15735 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Mupr5736g00003 zf-LSD1 2.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5736g00003 - - csin:114284780 258.84