Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5730g00004 ATGGCACTGGCCAAAGACCAAAAAATGCCACATGATTCAAGCATGAGCAGCAAGGTTCAAAACTGCATTTTCAATGAGTACCACAAATCTGTGCTAGAAGATCAGGAAGATGGCTCACAAACTACTAATGGTTTCAGCAATGATTCAGCTGTAACACATTCTCCTCCTCTATGTGGCAGCGGCAAAGGGTATGCTTATAAGGGCACAAACTATCATCAGCTTCAAGAAGCAGAATCTCTGATTAATTTCAAAGGGTATAGCAATCTCATGCAAGCTGGTGAATCTTTGGTTAGCTTTCAGCAGAACAGGATGGTCCCTAATAACTTTTACTTGAAAGATAATAGTCAAAAAGAGTATTGTGTTTGGGAGAATAATTTGCATCAAGGTTATAACCAGTGGAATCAGACTAGTCCAAGAAGCACTAGAGACATGCGCCTGGTGCAGGATGTCAATTGCTTTCAAACTGCTAGTGGCCATAGCTCCATAGTCAATAATGAGAAAGAGAAGCAACATGGTCAAAGTTCATCTGAGTGGCTCTACTCAGGAGCACCAACAATCCCTAATGATAATAGTATCCTCCCCAAGTTAGGAGCACAAGAATTAGTTTTGCCTAAGCGCCCTTCTATGGGAGAGAACATGAAAGCTACCAAGAAGCAATGCTTAACTGAGAGCAAAACGCCAAAACATCAGTCAAGCCCACCATCCAAGGATCCTCAAAGTGTGGCTGCCAAGAATCGTAGAGAGAGGATAAGCGAGCGGTTGAAGATACTACAAGAACTGGTGCCTAATGGCTCCAAGGTTGATTTGGTTACTATGCTGGAGAAAGCAATTAGTTATGTAAAGTTTCTTCAACTGCAAGTGAAGGTGTTGGCAACTGATGAATTTTGGCCTGTGCAAGGAGGAAAGCCTCCTGATATTTCTCAAGTAAAGGAAGCCATCGATGCCATTCTTTCATCACAAAGAGAGAGAAGTTAA 975 0.4215 MALAKDQKMPHDSSMSSKVQNCIFNEYHKSVLEDQEDGSQTTNGFSNDSAVTHSPPLCGSGKGYAYKGTNYHQLQEAESLINFKGYSNLMQAGESLVSFQQNRMVPNNFYLKDNSQKEYCVWENNLHQGYNQWNQTSPRSTRDMRLVQDVNCFQTASGHSSIVNNEKEKQHGQSSSEWLYSGAPTIPNDNSILPKLGAQELVLPKRPSMGENMKATKKQCLTESKTPKHQSSPPSKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKPPDISQVKEAIDAILSSQRERS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5730g00004 324 FunFam Transcription factor bHLH83 232 291 - -
Mupr5730g00004 324 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 87 292 IPR045843 GO:0003700|GO:0006355
Mupr5730g00004 324 Pfam Helix-loop-helix DNA-binding domain 243 284 IPR011598 GO:0046983
Mupr5730g00004 324 CDD bHLH_AtIND_like 235 297 - -
Mupr5730g00004 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 233 293 IPR036638 GO:0046983
Mupr5730g00004 324 MobiDBLite consensus disorder prediction 222 246 - -
Mupr5730g00004 324 Gene3D - 230 291 IPR036638 GO:0046983
Mupr5730g00004 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 234 283 IPR011598 GO:0046983
Mupr5730g00004 324 SMART finulus 240 289 IPR011598 GO:0046983
Mupr5730g00004 324 MobiDBLite consensus disorder prediction 222 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5730g00004 Mupr-Chr5730 24940 26454 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5730g00004 119 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 53.774 1.65e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr5730g00004 HLH 1.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5730g00004 - - gmx:100810010 533.872