Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5730g00003 ATGGAGAGTCCTCATTCGCTTTCTCCTTCTTCCTCTTCCTCTTATTCCTCCGACGGCGTCAATTTCGAGACGGAGGAGCCGCGGACGCCGCTGGCCGTGCGCCGAGCGCTGCAGCTACTGAGCTCCGGCCAGCCGGAGATGCGCCTCCAAGCCGCTCGCGACATCCGCCGGCTCACGAAGACGTCACAACGTTGTCGGCGCCAGTTATCGGAAGCTGTCGGTCCACTCGTTTCCATGCTCCGAGTCGACTCGCCCGAGTCACACGAACCCGCTCTCCTCGCCTTGCTCAACCTCGCCGTCAAAGATGAAAAGAATAAAATCAATATTGTGGAGGCCGGTGCATTAGGACCGATAATTAGTTTCCTCAAGTCCCAAAATCTAAATCTGCAGGAGTCTGCAACTGCATCTTTGCTCACACTATCTGCCTCTTCAACCAACAAACCAATTATTAGTGCTTGTGGTGCAATTCCTCTTCTTGTGGAGATCCTTAGAGATGGAAGCCCCCAAGCTAAAGCTGATGCAGTAATGGCTCTCTCTAATTTATCAACACACCCTAATAATCTAAGCATCATTCTTGAGACAAATCCAATCCCTTTCATAATTGATCTTCTTAAAACCTGTAAAAAATCCTCAAAAACAGCTGAAAAATGCTGTGCTTTAATAGAATCCTTGGTGGATTATGATGAGGGCAGAACCGCCTTGACATCTGAAGAAGGTGGGGTTCTTGCAGTGGTGGAAGTTCTTGAAAGCGGCACTCTCCAAAGTAGAGAGCATGCTGTTGGAGCACTGTTGACAATGTGCCAAAGCGATCGATGTAAATACAGGGAACCAATTCTTAGAGAAGGTGTCATTCCAGGACTGCTTGAGCTTACTGTTCAAGGAACACCGAAGTCCCAGTCAAAAGCACGCACCCTTTTGCAGTTGCTGAGAGAGTCTCCTTATCCGAGATCTGAAATTCAACCCGACACTCTTGAGAATATAGTATGCAACATCATATCCCAGATTGATGGGGATGATCAATCTGGTAAGGCAAAGAAGATGCTGGCTGAGATGGTCCAAGTCAGCATGGAACAAAGTCTAAGACATTTACAGCAGAGGGCTCTCGTATGCACCCCAACTGATCTGCCTATAGCTGGCTGTGCTTCTGAA 1149 0.4848 MESPHSLSPSSSSSYSSDGVNFETEEPRTPLAVRRALQLLSSGQPEMRLQAARDIRRLTKTSQRCRRQLSEAVGPLVSMLRVDSPESHEPALLALLNLAVKDEKNKINIVEAGALGPIISFLKSQNLNLQESATASLLTLSASSTNKPIISACGAIPLLVEILRDGSPQAKADAVMALSNLSTHPNNLSIILETNPIPFIIDLLKTCKKSSKTAEKCCALIESLVDYDEGRTALTSEEGGVLAVVEVLESGTLQSREHAVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTPKSQSKARTLLQLLRESPYPRSEIQPDTLENIVCNIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPTDLPIAGCASE 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5730g00003 383 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 154 196 IPR000225 GO:0005515
Mupr5730g00003 383 SMART arm_5 61 100 IPR000225 GO:0005515
Mupr5730g00003 383 SMART arm_5 184 226 IPR000225 GO:0005515
Mupr5730g00003 383 SMART arm_5 102 142 IPR000225 GO:0005515
Mupr5730g00003 383 SMART arm_5 143 183 IPR000225 GO:0005515
Mupr5730g00003 383 SMART arm_5 228 268 IPR000225 GO:0005515
Mupr5730g00003 383 Gene3D - 17 369 IPR011989 -
Mupr5730g00003 383 MobiDBLite consensus disorder prediction 1 27 - -
Mupr5730g00003 383 PANTHER U BOX DOMAIN-CONTAINING 21 315 - -
Mupr5730g00003 383 MobiDBLite consensus disorder prediction 1 23 - -
Mupr5730g00003 383 SUPERFAMILY ARM repeat 35 332 IPR016024 -
Mupr5730g00003 383 FunFam U-box domain-containing protein 4 17 369 - -
Mupr5730g00003 383 Pfam Armadillo/beta-catenin-like repeat 146 182 IPR000225 GO:0005515
Mupr5730g00003 383 Pfam Armadillo/beta-catenin-like repeat 103 140 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5730g00003 Mupr-Chr5730 5660 9523 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5730g00003 33 310 U-box Gene Family AT2G23140 33.929 3.70e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5730g00003 - - gmx:100809684 665.996