Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5728g00003 ATGAGAGAACAAAGCTTTGGAGATAAGATGCATGGAATAACTCTCCCTCTCCTCTGTTGTGCTCATACTCACACTCACCTTCAGCTTCAGCTTCCTTTGAGATCTCTTCTCCCACTTACCCCTTCACCAAGTTGTTGTAAAATTAGGTATGAAAGTGGCTTCAACCATTCACAGTGGAAGCACGAGAATAAAGGAAGAGGGAGCAATAGAATGATGGTTGTGAGAGCGACGCGTGGCGAGTCTCCGTACCAAGTTTTGGGCGTGTCTCCATCAGCGACTGTCGATGAAATCAAGAAGGCGTATCGGAAACTCGCTCTTAAGTATCATCCCGATGTCAATAAAGAGGATAAGGCACAGGAGAAATTTATGAGGATAAAACATGCATACAATACATTGCTAAATTCTAGTTTGCGCAAAAAATATGATTCTGGAAGTCGAGGTTATGATTTTTCTCAAGGAAGCCGAAGTAGGAATGCACAAGCTGAAGAAGAATTTTATGGACTAGAGGACTTCTTTAAGGATCTTCAAGAAGAATTCAGGAACTGGGAGGCAAACGCTGCTTCACAAGGAAAGCCAAAGAGTCTATGGGAGGAATTGGCGGAAATAGGAGAAGAATTTGTGGAGTTCCTTGAGAAAGAACTCAATATTACTGATCAAAATGATAATGATAAAACGCCTCAGGGAGGAAATGTATCTAACTTTTCTGGCAATAGAACTCAAGGTGAAGGCAGCAAGGGAAGCAGAACCGTTGAGGATAACCTTGATGAAATAGAAGCCACTCTGGCTCAGTTGAAAAAGGAATTAGGCTTATAG 813 0.4207 MREQSFGDKMHGITLPLLCCAHTHTHLQLQLPLRSLLPLTPSPSCCKIRYESGFNHSQWKHENKGRGSNRMMVVRATRGESPYQVLGVSPSATVDEIKKAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLLNSSLRKKYDSGSRGYDFSQGSRSRNAQAEEEFYGLEDFFKDLQEEFRNWEANAASQGKPKSLWEELAEIGEEFVEFLEKELNITDQNDNDKTPQGGNVSNFSGNRTQGEGSKGSRTVEDNLDEIEATLAQLKKELGL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5728g00003 270 Coils Coil 247 270 - -
Mupr5728g00003 270 ProSiteProfiles dnaJ domain profile. 81 145 IPR001623 -
Mupr5728g00003 270 CDD DnaJ 82 134 IPR001623 -
Mupr5728g00003 270 ProSitePatterns Nt-dnaJ domain signature. 122 141 IPR018253 -
Mupr5728g00003 270 MobiDBLite consensus disorder prediction 217 253 - -
Mupr5728g00003 270 SUPERFAMILY Chaperone J-domain 24 141 IPR036869 -
Mupr5728g00003 270 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 49 222 - -
Mupr5728g00003 270 Pfam DnaJ domain 82 142 IPR001623 -
Mupr5728g00003 270 SMART dnaj_3 80 137 IPR001623 -
Mupr5728g00003 270 Gene3D DnaJ domain 79 188 IPR036869 -
Mupr5728g00003 270 PRINTS DnaJ domain signature 117 137 IPR001623 -
Mupr5728g00003 270 PRINTS DnaJ domain signature 83 101 IPR001623 -
Mupr5728g00003 270 PRINTS DnaJ domain signature 101 116 IPR001623 -
Mupr5728g00003 270 MobiDBLite consensus disorder prediction 220 247 - -
Mupr5728g00003 270 FunFam Chaperone DnaJ-domain superfamily protein 78 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5728g00003 Mupr-Chr5728 10833 15179 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5728g00003 83 143 C2H2 Transcription Factor Family AT1G74250 40.299 2.20e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5728g00003 - - gmx:100793601 412.92