Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5725g00002 ATGCCTATGGCTTTCAATAACTTGTATATTCTTACGCTCTGTGTTTCCGTTGTGCTATCCTTCTTGGCACCGATTTCCATAGCTGATAGTGACCATGCAGTCATTCCACCAGAAACCATATGCTACTCAACCTTAAACCCTTCTTACTGCAAATTTGTGCTTGCTAATCAAAATGGTAGCGTATATGACTATTGCCGCATTTCTGTTCGAAAATCCTTGTCCCAGTCTCGTAAGTTATTAAACACGATATATTCATATCTTCAAAATCCCTCGTCTTTATCTCAATCCACAATTCGTGCTCTTGAAGATTGCCAATTCCTTGCTGAACTAAACTTTGAATATTTATCAAACACCCATGACACTGTTGATAAAGCTAGCGACGTTCTTCCCACCTCTCAAGCAGACGATGTGCACACATTGCTTAGTGCTGTTTTGACAAATCAACAAACTTGTTTAGACGGCCTACAAACTTCAGCTTCAGATCCAAGAGTGAAGAATGATCTTTCTTCCCCACTCTCGGATGATACGAAGCTTCACAGTGTCTCACTTTATTTGTTCACCAAGGCTTGGGTTCCTGAGAAGAAAAACTCAACATCATGGCAACACCAAGGGGGCATGCAGAATGATCGTTTACGCTTGAAGATGTTAAACAAAGCACGTGCCATTTATGATTCTGCTAGAGGCAACGGGAGAAAACTGCTTCAAACAATGGATGACAACGAAAGCGTTGTGGTGAGTGACATCGTGGTTGTTAGTAAGGATGGGAGTGGAAACTTTACCACTATCAACGATGCTATAGCTGCTGCACCAAATAACACAGCTGCTACCGATGGCTACTTCATCATTTTTATCACCGAGGGTATATATCAAGAGTATGTATCAATAGCAAAAAACAAGAAGTTCTTGATGTTAATTGGAGATGGAATCAATCGCACAATCATCACAGGCGACCACAATGTTGTTGACGGCTTTACAACATTCAACTCAGCTACATTTGCTGTGGTAGGACAAGGATTCGTAGCAATGAACATAACATTCCGCAACAGTGCTGGGGCAAGCAAGCACCAAGCAGTTGCATTTTATAGAGAATGTGACATATATGGCACAGTTGACTTCATATTTGGAAATGCAGCTGTTGTTTTGCAAAACTGCAACATGTATCCCCGCCTCCCCATGAGTGGACAATTCAATGCCATCACTGCGCAAGGTCGAACTGATCCAAATCAAAACACTGGCATTTCCATACAAAATGCAACCATAAAAGCAGCACAGGATTTGGCTCCCATGGTTGGCACTGTGGAAACATTCCTTGGCAGGCCATGGAAGGAGTACTCGAGGACTGTTTATATGCAGTCTTTCATGGATGATTTGATAGCTCCTGGTGGTTGGCATGAATGGAATGGGAATTTTGCACTCAACACCTTGTACTACGCAGAGTATGATAACATGGGTCCTGGTTCAAATACTGCCAACCGAGTCAAGTGGCCTGGCTATCATGTAATCGATGCTACCGATGCAGCTAATTTTACCGTGTCTAACTTCTTGGATGGGGATGATTGGGTGCCCCCAACTAGCCTTTGTTACTCCCTCTCCGTACTTCTCATTCTCCTACCCTTAATAGCTTCCGCAGACACCGTTCCAAATGCCACCACTCCCGTCTCCCCAGGAACCGCATGCAAATCCACCCCAGACCCATCCTATTGCAAATCCGTTCTCCCTCCCCAAAACGGCAACGTTTACGACTATGGCCGCTTTTCCGTTAAAAAGTCACTATCACAGGCCAACAAGTTCTTGAACCTTGTCGACAAATATCTCCAACGTCGCTCTTCTCTTTCCGCCACCGCCATACGCGCACTTCAAGATTGCCGCACTCTTGGGGAACTCAACTTCGATTTCCTCTCTAGCTCCTTCCAAACAGTGAACAAGACAACGAGGCTTCTCCCTAGCTTTCAAGCCGACGATATCCAAACCTTACTCAGCGCCATTCTCACAAACCAGCAAACATGCTTGGACGGCCTCAAAGACACCGCTTCAGCTTGGAGCGTCAGAAACGGTCTCACCGTCCCACTCTCCAACGACACCAAACTCTACAGTGTCTCTCTCGCTCTCTTCACTAAGGGTTGGGTTCCCAAAAAAGTCAATGCAGTGCACCCTACCAAGAAACAACTTGGGTTCCGAAACGGGCGTTTGCCGCTCAAGATGTCAAGCAGAACCCGCGCGATCTACGAGTCTGTGAGTAGGAGAAAGCTCCTTCAGACCTCCGTGGGTAGCGACGTCGTCGTGAGGGATATTGTGACTGTCAGCCAAGATGGAAGTGGGAACTTCACCACTATCAATGATGCCATTGCCGCAGCTCCTAACAAATCTGTCTCTACCGATGGCTACTTCCTTATCTATGTCACTGCTGGTGTTTACGACGAAATTGTGTCCATTGATAAGAAGAAAACGTACTTGATGTTGATCGGAGATGGTATCAACAAGACAATTATCACAGGCAATCGTAGCGTCGTCGATGGCTGGACAACCTTCAGCTCCGCAACATTAGCTGTGGTTGGGCAAGGATTCGTGGGTGTGAATATAACCGTCCGCAACACCGCGGGGGCCGCGAAGCACCAAGCAGTGGCAGTTCGAAACGGAGCAGATTTGTCGACGTTTTACAGTTGCAGCTTCGAGGGGTACCAAGACACGTTATACGTACATTCCCTGAGACAATTCTACAGCGAATGCGACATCTACGGGACAGTAGATTTCATATTCGGAAACGCTAAGGTGGTGTTTCAAAGTTGCAACATGTATCCTCGTCTCCCCATGAGCGGTCAATTCAACGCCATCACCGCACAAGGAAGAACAGACCCAAACCAAGACACGGGTATTTCCATCCACAACTGCACGATCAGAGCAGCTGATGATTTGGCTGCGAGTCCCGGTGCGGCTTCAACATATTTGGGAAGGCCGTGGAAGGAGTATTCCCGAACAGTTTATATGCAAACTTTTATGGACAGTTTGATCGACGCTGCCGGGTGGCGTGAATGGGACGGTGATTTTGCATTAAGCACTTTGTATTACGCAGAGTTCAACAACAGTGGGTCTGGCTCCAGCACCGCCAATAGAGTGACGTGGCCCGGTTATCATGTCATTAACGCCACGGATGCAGTTAACTTTACCGTGTCCAATTTCTTGCTTGGAGATGATTGGTTGCCGCAGACAGGAGTCACTTACACCGATAACTTAATATAG 3237 0.4643 MPMAFNNLYILTLCVSVVLSFLAPISIADSDHAVIPPETICYSTLNPSYCKFVLANQNGSVYDYCRISVRKSLSQSRKLLNTIYSYLQNPSSLSQSTIRALEDCQFLAELNFEYLSNTHDTVDKASDVLPTSQADDVHTLLSAVLTNQQTCLDGLQTSASDPRVKNDLSSPLSDDTKLHSVSLYLFTKAWVPEKKNSTSWQHQGGMQNDRLRLKMLNKARAIYDSARGNGRKLLQTMDDNESVVVSDIVVVSKDGSGNFTTINDAIAAAPNNTAATDGYFIIFITEGIYQEYVSIAKNKKFLMLIGDGINRTIITGDHNVVDGFTTFNSATFAVVGQGFVAMNITFRNSAGASKHQAVAFYRECDIYGTVDFIFGNAAVVLQNCNMYPRLPMSGQFNAITAQGRTDPNQNTGISIQNATIKAAQDLAPMVGTVETFLGRPWKEYSRTVYMQSFMDDLIAPGGWHEWNGNFALNTLYYAEYDNMGPGSNTANRVKWPGYHVIDATDAANFTVSNFLDGDDWVPPTSLCYSLSVLLILLPLIASADTVPNATTPVSPGTACKSTPDPSYCKSVLPPQNGNVYDYGRFSVKKSLSQANKFLNLVDKYLQRRSSLSATAIRALQDCRTLGELNFDFLSSSFQTVNKTTRLLPSFQADDIQTLLSAILTNQQTCLDGLKDTASAWSVRNGLTVPLSNDTKLYSVSLALFTKGWVPKKVNAVHPTKKQLGFRNGRLPLKMSSRTRAIYESVSRRKLLQTSVGSDVVVRDIVTVSQDGSGNFTTINDAIAAAPNKSVSTDGYFLIYVTAGVYDEIVSIDKKKTYLMLIGDGINKTIITGNRSVVDGWTTFSSATLAVVGQGFVGVNITVRNTAGAAKHQAVAVRNGADLSTFYSCSFEGYQDTLYVHSLRQFYSECDIYGTVDFIFGNAKVVFQSCNMYPRLPMSGQFNAITAQGRTDPNQDTGISIHNCTIRAADDLAASPGAASTYLGRPWKEYSRTVYMQTFMDSLIDAAGWREWDGDFALSTLYYAEFNNSGSGSSTANRVTWPGYHVINATDAVNFTVSNFLLGDDWLPQTGVTYTDNLI 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5725g00002 1078 SUPERFAMILY Pectin lyase-like 762 1074 IPR011050 -
Mupr5725g00002 1078 Pfam Plant invertase/pectin methylesterase inhibitor 38 179 IPR006501 GO:0004857
Mupr5725g00002 1078 Pfam Plant invertase/pectin methylesterase inhibitor 557 703 IPR006501 GO:0004857
Mupr5725g00002 1078 FunFam Pectinesterase 359 532 - -
Mupr5725g00002 1078 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 188 IPR035513 -
Mupr5725g00002 1078 Gene3D - 362 532 IPR012334 -
Mupr5725g00002 1078 Gene3D - 243 361 IPR012334 -
Mupr5725g00002 1078 Gene3D - 759 1077 IPR012334 -
Mupr5725g00002 1078 SMART PMEI_2 32 185 IPR006501 GO:0004857
Mupr5725g00002 1078 SMART PMEI_2 550 703 IPR006501 GO:0004857
Mupr5725g00002 1078 ProSitePatterns Pectinesterase signature 2. 366 375 IPR033131 -
Mupr5725g00002 1078 PANTHER PECTINESTERASE 540 1067 - -
Mupr5725g00002 1078 FunFam Pectinesterase 556 706 - -
Mupr5725g00002 1078 CDD PMEI-like_3 557 708 - -
Mupr5725g00002 1078 FunFam Pectinesterase 38 188 - -
Mupr5725g00002 1078 Gene3D Invertase/pectin methylesterase inhibitor family protein 556 706 IPR035513 -
Mupr5725g00002 1078 CDD PMEI-like_3 39 190 - -
Mupr5725g00002 1078 Pfam Pectinesterase 765 1063 IPR000070 GO:0030599|GO:0042545
Mupr5725g00002 1078 Pfam Pectinesterase 360 518 IPR000070 GO:0030599|GO:0042545
Mupr5725g00002 1078 NCBIfam pectinesterase inhibitor domain 529 705 IPR006501 GO:0004857
Mupr5725g00002 1078 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 188 IPR035513 -
Mupr5725g00002 1078 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 557 706 IPR035513 -
Mupr5725g00002 1078 ProSitePatterns Pectinesterase signature 2. 911 920 IPR033131 -
Mupr5725g00002 1078 FunFam Pectinesterase 759 1077 - -
Mupr5725g00002 1078 SUPERFAMILY Pectin lyase-like 244 529 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5725g00002 Mupr-Chr5725 5668 16245 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5725g00002 8 528 Carbohydrate Esterase AT4G02330 53.697 0.0 583