Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5725g00001 ATGGCTTTCAAGAACTTGTCCGTTCATAAGCTCTGTGTTTTCCTTGTGCTATCCTTGTTGGCACCGATTTCCATAGCTGATAATAACCATGCAGTCGTTCCACCAGCAACCATTTGCAACTCCATCACCGTAGACCCTTCTTTCTGCCAAACTGTGCTTGATAATCAAAATGGCAGCATCTTTGACTATGGTCGAATTTCTGTCCGAAAGTCCCTGTCCCAGTCCCGCAAATTCTTGAACTTAGTAAATTCATATCTTCAAAACCGATCCTCTTTGTCTCTATCCACAATTCGCGCCCTCGAAGACTGTCAATTCCTTGCTGAACTAAGCTTCGAATACTTATCAAATGCACTTGACACCGTTAATAAAGCTAGCAATGTTCTTCCAACCACTCAAGCCGAAGACCAGCACACCATGCTCAGTGCTGTTTTGACAAACCAAATTACTTGTTTAGAAGGCTTGCAGACCACAGCTTATGATAAAGGAGTGAAGAGTAATCTTTTGTCCTCACTCTCTGACGACACGAAGCTTCACAGCGTTTCCCTTGCCTTGTTCGCCAAGGGTTGGGCACCTGAGAATAAAATCTCAACATCGTGGCAACCCAATGGGAGACATTTGAGTTTCCGCAATGGCCGTTTACCGTTGAAGATGTCGAACCGTGTACGTGCTATTTATGATTCTGCAAGAGGTCACGGGAGAAAACTACTTCAAAATGACGAAAGTGTATTGGTAAGTGACATTGTGGTTGTTAGCCAGGATGGGAGCGGGAACTTCACCACCATCAAAGATGCTTTAGCAGTTGCGCCAAATAACACAAATGCTACTGATGGCTACTTTTTAATTTATGTCACACAAGGTGTGTATCAAGAGTATGTATCCATACCCAAAAACACAAAGTACTTGATGATGATCGGAGATGGGATCAATCAAACGATTATCACCGGCGATCATAATGTTGTTGATAATTTCACAACATTCAACTCAGCAACATTTGCTGTGGTAGCACAAGGGTTCGTAGCAGTTAACATAACATTCCGAAACACTGCTGGGGCAAGCAAGCACCAAGCAGTTGCAGTGAGAAATGGAGCTGATTTGTCAACCTTCTACAGCTGCAGCTTTGAAGGGTATCAAGACACCTTGTACACGCATTCTCTTAGGCAGTTTTACTGCGAATGTGACATCTACGGCACGGTTGACTTCATTTTTGGGAATGCCGCTGTTGTTTTTCAAACATGTAACTTGTACCCCCGCCTTCCCATGAGTGGACAATTCAACGCCATCACTGCACAAGGCCGAACAGATCCAAATCAAAACACAGGCACTTCCATACAGAACGCCACTATAAAAGCTGCTGCTGATTTGGCTCCGATGGTTGGTACCGTGAATACGTACCTTGGGAGACCATGGAAAGAGTACTCAAGGACGGTTTATATGCAGTCTTTCATGGATAGTTTGATAGATCCTTCTGGTTGGCATGATTGGAGTGGGGATTTTGCCCTAAGCACCTTGTACTATGCAGAGTATAATAACACTGGACCTGGTTCAAACACAGGAAACCGAGTGACGTGGCCTGGTTATCATGTTATCAATGCTACTGATGCGGCTAATTTTACTGTCTCCAACTTCTTGAGCGGGGATAGTTGGTTACCTGTAACTGGCGTCCCATACACGAGTGGATTCGTATAG 1686 0.4431 MAFKNLSVHKLCVFLVLSLLAPISIADNNHAVVPPATICNSITVDPSFCQTVLDNQNGSIFDYGRISVRKSLSQSRKFLNLVNSYLQNRSSLSLSTIRALEDCQFLAELSFEYLSNALDTVNKASNVLPTTQAEDQHTMLSAVLTNQITCLEGLQTTAYDKGVKSNLLSSLSDDTKLHSVSLALFAKGWAPENKISTSWQPNGRHLSFRNGRLPLKMSNRVRAIYDSARGHGRKLLQNDESVLVSDIVVVSQDGSGNFTTIKDALAVAPNNTNATDGYFLIYVTQGVYQEYVSIPKNTKYLMMIGDGINQTIITGDHNVVDNFTTFNSATFAVVAQGFVAVNITFRNTAGASKHQAVAVRNGADLSTFYSCSFEGYQDTLYTHSLRQFYCECDIYGTVDFIFGNAAVVFQTCNLYPRLPMSGQFNAITAQGRTDPNQNTGTSIQNATIKAAADLAPMVGTVNTYLGRPWKEYSRTVYMQSFMDSLIDPSGWHDWSGDFALSTLYYAEYNNTGPGSNTGNRVTWPGYHVINATDAANFTVSNFLSGDSWLPVTGVPYTSGFV 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5725g00001 561 Gene3D - 242 560 IPR012334 -
Mupr5725g00001 561 Pfam Pectinesterase 248 546 IPR000070 GO:0030599|GO:0042545
Mupr5725g00001 561 SMART PMEI_2 30 184 IPR006501 GO:0004857
Mupr5725g00001 561 FunFam Pectinesterase 36 187 - -
Mupr5725g00001 561 SUPERFAMILY Pectin lyase-like 244 559 IPR011050 -
Mupr5725g00001 561 FunFam Pectinesterase 241 560 - -
Mupr5725g00001 561 CDD PMEI-like_3 37 190 - -
Mupr5725g00001 561 Pfam Plant invertase/pectin methylesterase inhibitor 37 184 IPR006501 GO:0004857
Mupr5725g00001 561 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
Mupr5725g00001 561 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 187 IPR035513 -
Mupr5725g00001 561 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 187 IPR035513 -
Mupr5725g00001 561 PANTHER PECTINESTERASE 24 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5725g00001 Mupr-Chr5725 744 2856 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5725g00001 14 561 Carbohydrate Esterase AT1G02810 59.652 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5725g00001 K01051 - gmx:100786124 960.288