Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5716g00001 ATGAAATATATATTACTTCTCCTTGTCATTTTCAAGATTATCAAGAGGAAGTTCACAAAGCTACAGGAGGCTATGGGGTTTCAAACATCACATAGCACTAAACGGATACCACAGTCAAATTTCAAAGCAAAGGAGGACTCAATTGATACTCATGAAAACTCATTAATTCGAAGGACCACACTGAATTTGACTGATCATACCCAAACCAATACCAAGTTCATTTTCTCTGAGTATGATTCATGGGTAGTAAGACACCCTTCTGCATTGAACTCGTTTGATTGGTTGATAAAAGCCGCCACTGGGAAGAGGATCATCGTATTTTTGGACTACGATGGTACCTTATCACCAATTGTGAATGACCCTGATCGCGCCTTCATGTCTGATGAGATGCGTGCAGCAGTATATGAAGTTGCTACTTCTTTTCCAACCGCAATAATTAGTGGAAGAAGTAGAGATAAGGTAAAAGATTTCGTGAAGTTAAATAATTTATACTATGCTGGGAGCCATGGCATGGACATAATGGCACCATCAATGCCAGTTAGATCTTCTGACAGCAAGCATTTTGACATTGCCCGTAACACAAATGGTACTGAAGTTCCCTTTCAACCTGCCAAAGAGTTTTTGCCTGCAATTCGAGAGATATTAAGAAGAGTAAAGAATGAAGTAAAGGAAATAAAAGGAGCAATGGTAGAGGACAACGGATTCTGCATCTCTGTACACTTCAGGCAGGTCCAAGAAAAGGATTATGACGTTTTGGAAGAGAAAGTGAAGTCTGTGCTTGAAGATAATCCACAATTTTGCTTAACAGAGGGTAAAAAGGTTATGGAAATAAGGCCATCTATAAAGTGGAACAAAGGAAATGCTGTAGAATATTTTCTTGACACCTTAGGATTAAGCAGTTGCACTGATATCGTTCCTGTGTACATTGGCGATGATAGAACTGATGAAGATGCTTTTAAGGTGATACAGAGTAGAGAGCAAGGTTATCCAATTATAGTGTCTTCAATTCCAAGAGAAACTAACGCTTTGTACTCTCTGCGTGACCCATCGGAAGTACTAATCTTTTTGTCACAGTTGGCAAAATGGAGGAAAACCTCTTACTCAAGCAGGCCTTTAAATTTTGGTTAA 1128 0.3901 MKYILLLLVIFKIIKRKFTKLQEAMGFQTSHSTKRIPQSNFKAKEDSIDTHENSLIRRTTLNLTDHTQTNTKFIFSEYDSWVVRHPSALNSFDWLIKAATGKRIIVFLDYDGTLSPIVNDPDRAFMSDEMRAAVYEVATSFPTAIISGRSRDKVKDFVKLNNLYYAGSHGMDIMAPSMPVRSSDSKHFDIARNTNGTEVPFQPAKEFLPAIREILRRVKNEVKEIKGAMVEDNGFCISVHFRQVQEKDYDVLEEKVKSVLEDNPQFCLTEGKKVMEIRPSIKWNKGNAVEYFLDTLGLSSCTDIVPVYIGDDRTDEDAFKVIQSREQGYPIIVSSIPRETNALYSLRDPSEVLIFLSQLAKWRKTSYSSRPLNFG 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5716g00001 375 Gene3D - 104 193 IPR023214 -
Mupr5716g00001 375 Gene3D - 194 371 IPR023214 -
Mupr5716g00001 375 SUPERFAMILY HAD-like 105 363 IPR036412 -
Mupr5716g00001 375 FunFam Trehalose 6-phosphate phosphatase 209 367 - -
Mupr5716g00001 375 Coils Coil 242 262 - -
Mupr5716g00001 375 CDD HAD_TPP 106 352 - -
Mupr5716g00001 375 FunFam Trehalose 6-phosphate phosphatase 104 190 - -
Mupr5716g00001 375 NCBIfam HAD-IIB family hydrolase 105 322 IPR006379 -
Mupr5716g00001 375 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 46 368 IPR044651 GO:0004805|GO:0005992
Mupr5716g00001 375 Pfam Trehalose-phosphatase 107 350 IPR003337 GO:0003824|GO:0005992
Mupr5716g00001 375 NCBIfam trehalose-phosphatase 101 360 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5716g00001 Mupr-Chr5716 14609 18514 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5716g00001 102 371 Trehalose Biosynthesis Gene Families AT1G23870 27.402 9.31e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5716g00001 K01087 - gmx:100809194 661.759