Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5709g00003 ATGAGAGAAGATCGTGCCGTTGAAGGTGCACTTCCAACAAAGCATCATGGTGCTGGATATAATAAAAAGAAATTGTATAAGAAGAACCAACCAACAAGCAGCGAGAAAAGTTACCCACCTTGTCAGTATTGCGGAAAAATGGGTCATCCTCCATTCAAATGTTGGAGGAGACCTGAAGTGAAGTGCAGTAGGTGCAATCAGATCAGACATGAAGTAGTAATTTGCAAAGCAAATATCCAGCAAGTTGTAGTTGATGCACAAAATGTGCAAGAGAATGTGCAACAAAAGAATGTTGCTCAAGTTGCTGATGAAGAAGAGGAGCAGCTTTTTGTGGCCACTTGCTTTGCCATCTCCAATTCAAGCGAGAAGTGGCTAATTGACAATGGTTGCACTAATCATATGACATTTGATAGTGACCTCTTTAAGGAATTGGATATTTCTATAGTTTCCAAAGTGAAAATTAGAAATGGAGAACACATTGCAGTAAAAGGAAAAGACACAGTAACAATTGAAAGTATTTCAAGTACAAAACTTATCAAAGATGTGTTATTTGTACCTAATATCAGCCAAATTTTGTTGAGTGTTGGCCAGTTGATTCAAAAAGGTTTCAAAGTTATCTTTGAAAGTGATCAGTGTTTGATCAAAGATGTAGATGATAACAAGGTATTCAAAGTAAAAATGAAAGGAAAAAGCTTTGAGCTTGATTCATTGAAGGAGGAGCAAAAAGCATTCTCTACAACTGCAATTGCAACTTCATCTACTAAACCAACAAAAACTCACTCAATTACAAGGCCTCCACCTTCTGCTGGTGTCATGAAAGATGTCAATAGGAAAGTTATTAGAAGAAGTGGTACACATAAGGAAGACACGCAAAGGGGTTGTCGCAATGGTTCTAATTGTCGTTATCAGCATGACTTATCAGGAATGAGTCGAATTGCTAAAAGACTGAAAGAGGAGCAAAAAGCATTCTCTACAACTGCAATTGCAACTTCATCTACTAAACCAACAAAAACTCACTCAATTACAAGGCCTCCACCTTCTGCTGGTGTCATGAAAGATGTCAATAGGAAAGTTATTAGAAGAAGTGGTACACATAAGGAAGACACGCAAAGGGGTTATCGCAATGATTCTAATTGTCGTTATCAGCATGACATATCAGGAATGAGTCAAATTGCTAAAAGACTGAAATTATTAGTGGTGGTTGCTAGAATTACCTGA 1218 0.3752 MREDRAVEGALPTKHHGAGYNKKKLYKKNQPTSSEKSYPPCQYCGKMGHPPFKCWRRPEVKCSRCNQIRHEVVICKANIQQVVVDAQNVQENVQQKNVAQVADEEEEQLFVATCFAISNSSEKWLIDNGCTNHMTFDSDLFKELDISIVSKVKIRNGEHIAVKGKDTVTIESISSTKLIKDVLFVPNISQILLSVGQLIQKGFKVIFESDQCLIKDVDDNKVFKVKMKGKSFELDSLKEEQKAFSTTAIATSSTKPTKTHSITRPPPSAGVMKDVNRKVIRRSGTHKEDTQRGCRNGSNCRYQHDLSGMSRIAKRLKEEQKAFSTTAIATSSTKPTKTHSITRPPPSAGVMKDVNRKVIRRSGTHKEDTQRGYRNDSNCRYQHDISGMSQIAKRLKLLVVVARIT 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5709g00003 405 MobiDBLite consensus disorder prediction 248 271 - -
Mupr5709g00003 405 MobiDBLite consensus disorder prediction 324 343 - -
Mupr5709g00003 405 MobiDBLite consensus disorder prediction 248 264 - -
Mupr5709g00003 405 MobiDBLite consensus disorder prediction 1 36 - -
Mupr5709g00003 405 MobiDBLite consensus disorder prediction 324 349 - -
Mupr5709g00003 405 SUPERFAMILY Retrovirus zinc finger-like domains 33 78 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5709g00003 Mupr-Chr5709 21076 22693 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr5709g00003 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5709g00003 - - mtr:11413243 264.618