Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5701g00004 ATGAGCACTACATTTGAAGTGCAAGAACCCACCTTCTCTGATGATGATATAGTTGTTTTCAATGTGTTTGTGGCAACTTTAGAGCTAAGGAATAAGTCTCTCCTTGTGGACTTAGATGTACCTCAAACTTTTCTTGATGGCCATGACTGTGACATGGTTGCAAATTTTTCTAAAATGTTATTCGATTCAATACTACAAAGCCGTGAAGTTAACTTAGATTATTTTTGTATATTTGTTAATGTATTCAAGGGTTGTTGTTCATACAACATAGTCAATAACAAAAGGTTCTTTCATGGTGAACAAGTTCCATCAGTTGAGTTGGTGCAAAGAATGGCTTGTCAAGGTGGTAAACATTCTTTGCCTACTGGGGCAACGACACTTGAAAAATTCAAGGTTCAAGTTCATGAAAAGGATAATTGTGTAATATGCTTGAAAGAATTCAACTCAAGTGATGATGTAGCAAAGTTGCCTTGTTCTCATATTTGTCACTATAATTGTATTTTAGAATGGTTTGGGCATAGAGGTACATGCCCTATATGTCGCTTTGCATGTAGTGATCATGTCTCCCATAAATAA 576 0.3559 MSTTFEVQEPTFSDDDIVVFNVFVATLELRNKSLLVDLDVPQTFLDGHDCDMVANFSKMLFDSILQSREVNLDYFCIFVNVFKGCCSYNIVNNKRFFHGEQVPSVELVQRMACQGGKHSLPTGATTLEKFKVQVHEKDNCVICLKEFNSSDDVAKLPCSHICHYNCILEWFGHRGTCPICRFACSDHVSHK 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5701g00004 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 189 IPR013083 -
Mupr5701g00004 191 ProSiteProfiles Zinc finger RING-type profile. 140 181 IPR001841 -
Mupr5701g00004 191 SUPERFAMILY RING/U-box 128 185 - -
Mupr5701g00004 191 SMART ring_2 140 180 IPR001841 -
Mupr5701g00004 191 Pfam Ring finger domain 138 181 IPR001841 -
Mupr5701g00004 191 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 117 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5701g00004 Mupr-Chr5701 19139 19789 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5701g00004 57 182 C3H Transcription Factor Family AT5G60820 28.261 1.65e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5701g00004 - K11982 aprc:113862471 164.466