Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5693g00005 ATGGAAGGAGATCAAGTTCAAGAATTCAAACACGCGTGCAAGTTCTGCAGTAAGAGCTTCCCCTGCGGAAGATCCCTGGGGGGTCACATGAGGTCTCATGTGACCAACTTGTCATCGGAGGCAGATGAAAAAGAAAAGCTTAGGAAGCTTGCGTCGTCAGAGAAAGACAAAGATTCCGAAGCTGCAACTAACGCTGGGTACGGCCTCAGAGAGAACCCCAAGAAGACTTGGAGAATCTCGGATTACTCGAGTGAAGACGCTTTGGTTTTGGACAAGTTCTGCAAAGAGTGTGGCAAAGGCTTCCACTCTTGGAAGGCCTTGTTTGGCCACATGAAATGCCACTCCGAGAAAGAACGAGTTTCCAACAGCTTGGAGGATCAAGATTCTTGGACTAACGCTGATTCTAGCCAGAAGGTGGTTATGGATAGCCAATCTGACAACGAAGCAACTGCTCCAAGTAGGAGAAGAAGGTCCAAGAGAAGAACAAGGTACACGGTTGCTTCTGCTGCAGCAACTTCTTCGCTTGTGTCTTTTGCCAATCCTTCTTCTTCTCTCTCTGAGGTTGAGCAAGAGCAAGAAGAGGTTGCTATGAGCTTGATGATGCTTAGTAGGGATGCCAGTCCTTGGAGTGGTCCTCATTCTGTTGCTGAGTCCTCTGACAATAACTCTGCTTACTTCGAAGCTCCTACTAATTTGGTTTCCAACCTCACTCCCAACACACCAAAACTCATCAAGCAAAGTGATAACAACTGGGACTTTGCCAATTCTGAGAATCCCAACTCAATCAGAGTCAGAGGGAAGAGTTCACAACTTTTTACTACTGAAAATGGATTTAGAGTGAACAAGAGTGGAGTTTCCAATAAAGGGTGTGAAAAGGCCAACAAGTCTGAGCTTGTTGACTATGTGTCTGCATTGGAGGACTCTGAAGGGGAACATGGGAGGAGCAGAGTCAATGGAACAGAATCGGTTTTCACTGCTGGCAACAACTACAGTTCAATGAAGACAAGGTTTTCTGTTTCTGGTTCTGAATTGAAGTCAAATAAGAACTGGGTGGACAAGGCTTCGGAAGCTGAATCCAGCAAGAACTCTAGTAAGAGAGGCAAGTTTGAGTGTACCACTTGCAACAAAATCTTCCACTCATACCAAGCTCTTGGTGGCCATAGAGCTAGCCACAAGAAGATCAAAGGCTGCTTTGCTTCAAGGAATGAGAGCAGTGAAAACAGCATTGAAACTGATCTCTCTGCTGATCCTGCAACTGAAAACAAGCTCGTGAAGAACAGTGACAGTCAGTATCTGGATGTACATCAACATGGTGCTGGTTTTCATAATGAGGTGGAGAAAGTTAGTGAGTCCAAGAAGAGCAAGGGGCATGAGTGCCCAATTTGCTTCAAAGTTTTTCCATCTGGCCAAGCCTTGGGTGGCCATAAGAGATCTCATATGGCTGGTGGGACTGAGAGTAGAAGCTTTCAAACAGTTGTGCTTCAGGAACCAGTAGCAGAAATTAGGGACTTCCTTGATCTTAACCTTCCTGCTGCTACTGAGGAAGAAAGCAATAGTCATGCTGACTCTAACAGACCCTGGTGGGTAGTAGAAGACAACCACAAACAGGAGGCACTGGATATGATGTGTCTTCTTCTTCTTCTTCTTCAGGATGCTTCTTTTACTGCTTTGTCGCCTATTGCAAACAGATTGAAAGGAATGCTATGCAATCTGAACAGTGCATATTTGGTTGCTAGTTAG 1740 0.454 MEGDQVQEFKHACKFCSKSFPCGRSLGGHMRSHVTNLSSEADEKEKLRKLASSEKDKDSEAATNAGYGLRENPKKTWRISDYSSEDALVLDKFCKECGKGFHSWKALFGHMKCHSEKERVSNSLEDQDSWTNADSSQKVVMDSQSDNEATAPSRRRRSKRRTRYTVASAAATSSLVSFANPSSSLSEVEQEQEEVAMSLMMLSRDASPWSGPHSVAESSDNNSAYFEAPTNLVSNLTPNTPKLIKQSDNNWDFANSENPNSIRVRGKSSQLFTTENGFRVNKSGVSNKGCEKANKSELVDYVSALEDSEGEHGRSRVNGTESVFTAGNNYSSMKTRFSVSGSELKSNKNWVDKASEAESSKNSSKRGKFECTTCNKIFHSYQALGGHRASHKKIKGCFASRNESSENSIETDLSADPATENKLVKNSDSQYLDVHQHGAGFHNEVEKVSESKKSKGHECPICFKVFPSGQALGGHKRSHMAGGTESRSFQTVVLQEPVAEIRDFLDLNLPAATEEESNSHADSNRPWWVVEDNHKQEALDMMCLLLLLLQDASFTALSPIANRLKGMLCNLNSAYLVAS 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5693g00005 579 Gene3D Classic Zinc Finger 366 479 - -
Mupr5693g00005 579 ProSitePatterns Zinc finger C2H2 type domain signature. 371 391 IPR013087 -
Mupr5693g00005 579 ProSitePatterns Zinc finger C2H2 type domain signature. 13 33 IPR013087 -
Mupr5693g00005 579 MobiDBLite consensus disorder prediction 35 67 - -
Mupr5693g00005 579 MobiDBLite consensus disorder prediction 125 148 - -
Mupr5693g00005 579 ProSiteProfiles Zinc finger C2H2 type domain profile. 457 479 IPR013087 -
Mupr5693g00005 579 ProSiteProfiles Zinc finger C2H2 type domain profile. 369 396 IPR013087 -
Mupr5693g00005 579 SUPERFAMILY beta-beta-alpha zinc fingers 93 391 IPR036236 -
Mupr5693g00005 579 ProSitePatterns Zinc finger C2H2 type domain signature. 459 479 IPR013087 -
Mupr5693g00005 579 MobiDBLite consensus disorder prediction 348 367 - -
Mupr5693g00005 579 Gene3D Classic Zinc Finger 2 66 - -
Mupr5693g00005 579 MobiDBLite consensus disorder prediction 36 61 - -
Mupr5693g00005 579 SMART c2h2final6 457 479 IPR013087 -
Mupr5693g00005 579 SMART c2h2final6 11 33 IPR013087 -
Mupr5693g00005 579 SMART c2h2final6 369 391 IPR013087 -
Mupr5693g00005 579 SMART c2h2final6 92 114 IPR013087 -
Mupr5693g00005 579 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 528 - -
Mupr5693g00005 579 ProSiteProfiles Zinc finger C2H2 type domain profile. 11 33 IPR013087 -
Mupr5693g00005 579 MobiDBLite consensus disorder prediction 122 164 - -
Mupr5693g00005 579 MobiDBLite consensus disorder prediction 349 365 - -
Mupr5693g00005 579 Pfam C2H2-type zinc finger 369 393 - -
Mupr5693g00005 579 Pfam C2H2-type zinc finger 457 481 - -
Mupr5693g00005 579 Pfam C2H2-type zinc finger 94 116 - -
Mupr5693g00005 579 Pfam C2H2-type zinc finger 11 33 - -
Mupr5693g00005 579 SUPERFAMILY beta-beta-alpha zinc fingers 8 35 IPR036236 -
Mupr5693g00005 579 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 119 IPR013087 -
Mupr5693g00005 579 ProSitePatterns Zinc finger C2H2 type domain signature. 94 114 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5693g00005 Mupr-Chr5693 60133 63040 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5693g00005 4 515 C2H2 Transcription Factor Family AT1G26610 35.568 2.47e-71 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr5693g00005 zf-C2H2_6 2.6e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5693g00005 - - gmx:102669916 807.364