Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5691g00003 ATGGCGACGCCGTTGGACGGAGGAGGAGTGGCGGTGCTCCCTAATTCCGTCAACAAGGTGGACTCCTCCTCGGCTCTCAACGACGGCTTGAAGTGCTCGAAACCGGAGTCGCCGATTTTGATTTTCTTGTTCTTTCACAAAGCGATTCGGAATGAGCTTGATGCGCTGCATCGATTGGCCATGGCATTCGCCACCGGCAAGCGCTCCGATATTAAGCCGCTATCCGAGCGCTACCATTTTCTCAGCTCCATGTACAGGCACCACTCCAATGCTGAGGATGAGGTGATTTTTCCAGCTCTAGATATACGTGTGAAAAACGTAGCACAGACATATTCACTGGAGCACAAGGGTGAAAGCAACCTTTTTGATCATCTATTTGAGCTTTTAAATTCTTCCATCAATAATGATGAAAGTTTTCCCAGAGAGTTAGCATCCTGTGCGGGAGCTTTGCAGACATCAGTTAGTCAACACATGGCAAAGGAAGAGGAGCAGGTATTTCCACTGCTTATTGAGAAGTTTTCTCTTGAGGAACAGGCATCCTTAGTTTGGCAGTTTCTTTGCAGTATTCCTGTGAAAATGATGGCCGAATTTCTACCGTGGCTTTCAACATCTGTAACACCTGATGAATCTCAGGATTTGCGCAACTGCTTAATCAAGATCGTGCCACAGAAAAAGCTTCTTCAGAAGGTTGTTTTCACCTGGATGGAAGGAAGTAGCGTTAACACAGTTGAAAGTTGTGTAGATCATTCTCAAGTTCGATGTGCTTCTAGGTCAGTAACCCATCAGGTTGAGAAAGTAAACTGTGCTTGTGAATCCACGACAACTGGAAAAAGGAAATATTCTGGATCTATGATAGATGTTTCTGATACCACTGGAACACATCCTATAGATGAAATATTGCTCTGGCATAATGCAATAAAAAAAGAGTTAAGTGAGATAGCAGTGGAGACCAGAAAGATTCAACACTCTGGAGATTTTACTAATCTATCTGCTTTTAACGAAAGATTTCAATTCATTGCTGAAGTATGCATATTTCACAGTATTGCTGAGGACAAGGTTATTTTTCCAGCAGTAGATGGAGAATTTTCTTTCTTTCAGGAGCATGCTGAAGAAGAAAGCCAATTTAATGACTTCCGGCGTTTGATTGAAAGTATTCAAAGTGAAGGAGCATCATCTAATTCAGATGTTGAATTTTATTCCAAGTTATGCACACATGCTGATCATATAATGGAAACCATACAGAGGCATTTCCATAATGAAGAAGTTCAGGTTCTTCCACTTGCAAGAAAGCACTTTAGCTTTAGAAGGCAATGTGAACTTTTGTATCAAAGCTTATGCATGATGCCTCTGAAATTGATTGAGCGTGTCCTGCCATGGTTGGTAGGATCTTTAACTGAAGATGAAGCAAAGATGTTTCAGAGAAATATGCAGTTGGCAGCTCCAGCAACGGATTCTGCTCTAGTCACACTCTTCTGTGGATGGGCTTGCAAGGCTCGTAATGAAGGTGCATCAGGTTGTTGTCCTGCTCAAAGACTTTCTGATATTGAAGAAAATATTGGTCAGCCATCCTGTACTTGTGCATCTGCATTATCTAATAGACATTGCTCAGTGTTAGCTGAATCAGGTGGGAACAAAAGACCAGTCAAGCGAAACATATTGGAGTCGCACAAAAATGAAGATGTACCTGAAATTTCAGAGACTGAAAGTATTCAGAAACAATGTTGTAGTGTGCGGTCTTGTTGTGTGCCAGGTTTAGGAGTAAGTAGTAACAATTTGGGGCTGAGTTCTCTTTCTACAGCCAAGTCCTTACGCTCCTTGTCTTTCAGCTCTTCTGCTCCATCTCTTAATTCCAGTCTTTTCATATGGGAAACAGAGAGTAGCTCATGCAATGTTGGATCTACACAAAGACCAATTGATACCATTTTTAAATTCCATAAAGCTATACGCAAAGACTTGGAGTATCTAGATGTTGAATCTGGAAAGCTGAGTGAGGGTGATGAGACAATTCTTCTGCAATTTAATGGAAGATTTCGTCTTTTGTGGGGTTTGTATAGAGCTCATAGTAATGCTGAAGATGATATAGTATTTCCAGCTTTGGAATCCAAAGAGGCACTTCACAATGTGAGTCATTCGTACATGCTGGACCATAAGCAGGAAGAACAATTGTTTGAAGATATTTCCTGTGTTCTTTCAGAGTTTTCCGTCCTTCATGAAGCCTTGCAGATGACCCATATGTCAGAGGATTTAAGTGAAAGTAATTTTGGAACCTCTGATGTCAATACTAGTGATGATATAAAAAAATATAATGAACTTGCTACTAAGCTTCAGGGTATGTGCAAATCCATAAGAGTGACCCTGGATCAGCATCTTTTCAGAGAAGAATGTGAACTGTGGCCATTGTTTGGGAGACATTTCACTGTGGAAGAACAAGACAAGATAGTGGGCCGGATAATTGGAACAACAGGTGCTGAAGTTCTCCAATCAATGTTACCATGGGTGACGTCTGCACTTACTCAGGATGAACAGAACAAAATGATGGATACGTGGAAGCAGGCAACTAAGAACACTATGTTCAATGAATGGCTTAGTGAATGCTGGAAAGAGAGTCCAGTGTCTATAGCACCGACAGAAACATCAGATCATAGCACTTCTCGAAGAGGTGCTGAATATCAAGAGAGCTTGGATCACAATGATCAGATGTTCAAGCCAGGTTGGAAAGACATATTCCGAATGAATCAAAATGAACTTGAGTCAGAGATCCGGAAGGTATATCGAGACTCAACTCTTGATCCAAGGAGAAAGGCATATCTTGTGCAGAATCTACTGACAAGTCGATGGATAGCTGCCCAGCAGAAATCACCTAAAGCTTTATCGGAAGGATCATCTAACAGTGTAGAAATAGAAGGACTCTCACCATCATTTCAGGACCCGGAGAAACATGTATTTGGGTGTGAGCACTATAAGAGAAATTGCAAACTTCGGGCTGCATGTTGTGGCAAGTTATTTACGTGCAGATTTTGTCATGACAATGTCAGCGATCACTCAATGGATAGAAAAGCAACATCGGAAATGATGTGTATGCGCTGCCTGAATATACAGTCAATAGGGCCTATATGCATGACACCTTCATGTAATGGATTTTCAATGGCAAAGTACTATTGCAATATATGCAAATTTTTTGATGATGAAAGGAACGTATATCATTGCCCATTTTGCAATTTATGCCGCGTTGGACGAGGGCTTGGGATTGATTATTTTCATTGCATGAAATGCAATTGTTGCCTGGGGATTAAATCAGCATCTCATAAGTGCCTGGAGAAAGGTTTAGAAATGAACTGCCCAATTTGTTGCGACGACTTGTTCACTTCAAGTGCTACGGTCAGAGCTCTACCTTGCGGCCACTACATGCATTCTGCTTGCTTCCAGGCATACACGTGTAGTCACTACACATGTCCAATCTGCAGCAAGTCATTGGGAGATATGGCGGTTTATTTTGGTATGCTTGATGCCCTATTGGCTGCTGAGGAGCTTCCTGAAGAGTTTAAAGACCGGATATACTCTGCCATGACTGTGAACGGAAGGGCACTTCACGCTTCCACTGGTTGTATCACAAATGTGGATTTTGTGGCTCTTACAATACCCGGGTTATCAAGAGTGAGACGTCAAACTCCAGCTGCTCTTAGTCTGCTTCTTTTGACGGGAGGTAGACAGTTTGTAAATACTTGTATAGCAAATTAG 3738 0.4181 MATPLDGGGVAVLPNSVNKVDSSSALNDGLKCSKPESPILIFLFFHKAIRNELDALHRLAMAFATGKRSDIKPLSERYHFLSSMYRHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSSINNDESFPRELASCAGALQTSVSQHMAKEEEQVFPLLIEKFSLEEQASLVWQFLCSIPVKMMAEFLPWLSTSVTPDESQDLRNCLIKIVPQKKLLQKVVFTWMEGSSVNTVESCVDHSQVRCASRSVTHQVEKVNCACESTTTGKRKYSGSMIDVSDTTGTHPIDEILLWHNAIKKELSEIAVETRKIQHSGDFTNLSAFNERFQFIAEVCIFHSIAEDKVIFPAVDGEFSFFQEHAEEESQFNDFRRLIESIQSEGASSNSDVEFYSKLCTHADHIMETIQRHFHNEEVQVLPLARKHFSFRRQCELLYQSLCMMPLKLIERVLPWLVGSLTEDEAKMFQRNMQLAAPATDSALVTLFCGWACKARNEGASGCCPAQRLSDIEENIGQPSCTCASALSNRHCSVLAESGGNKRPVKRNILESHKNEDVPEISETESIQKQCCSVRSCCVPGLGVSSNNLGLSSLSTAKSLRSLSFSSSAPSLNSSLFIWETESSSCNVGSTQRPIDTIFKFHKAIRKDLEYLDVESGKLSEGDETILLQFNGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYMLDHKQEEQLFEDISCVLSEFSVLHEALQMTHMSEDLSESNFGTSDVNTSDDIKKYNELATKLQGMCKSIRVTLDQHLFREECELWPLFGRHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLSECWKESPVSIAPTETSDHSTSRRGAEYQESLDHNDQMFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLLTSRWIAAQQKSPKALSEGSSNSVEIEGLSPSFQDPEKHVFGCEHYKRNCKLRAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMRCLNIQSIGPICMTPSCNGFSMAKYYCNICKFFDDERNVYHCPFCNLCRVGRGLGIDYFHCMKCNCCLGIKSASHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEFKDRIYSAMTVNGRALHASTGCITNVDFVALTIPGLSRVRRQTPAALSLLLLTGGRQFVNTCIAN 1245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5691g00003 1245 ProSiteProfiles Zinc finger RING-type profile. 1113 1155 IPR001841 -
Mupr5691g00003 1245 CDD RING-H2_Pirh2-like 1112 1155 - -
Mupr5691g00003 1245 CDD Hr-like 297 426 - -
Mupr5691g00003 1245 SMART ring_2 1113 1154 IPR001841 -
Mupr5691g00003 1245 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1108 1203 IPR013083 -
Mupr5691g00003 1245 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 680 1185 - -
Mupr5691g00003 1245 FunFam Zinc finger protein-related isoform 1 1108 1157 - -
Mupr5691g00003 1245 Pfam CHY zinc finger 984 1059 IPR008913 GO:0008270
Mupr5691g00003 1245 ProSiteProfiles Zinc finger CTCHY-type profile. 1049 1112 IPR017921 -
Mupr5691g00003 1245 SUPERFAMILY CHY zinc finger-like 976 1040 IPR037274 GO:0008270
Mupr5691g00003 1245 CDD Hr-like 41 167 - -
Mupr5691g00003 1245 Pfam Hemerythrin HHE cation binding domain 43 169 IPR012312 -
Mupr5691g00003 1245 Pfam Hemerythrin HHE cation binding domain 294 428 IPR012312 -
Mupr5691g00003 1245 Pfam Hemerythrin HHE cation binding domain 637 800 IPR012312 -
Mupr5691g00003 1245 Gene3D nmb1532 protein domain like 36 187 - -
Mupr5691g00003 1245 Gene3D nmb1532 protein domain like 297 444 - -
Mupr5691g00003 1245 Gene3D nmb1532 protein domain like 633 873 - -
Mupr5691g00003 1245 ProSiteProfiles Zinc finger CHY-type profile. 977 1046 IPR008913 GO:0008270
Mupr5691g00003 1245 CDD Hr-like 639 799 - -
Mupr5691g00003 1245 SUPERFAMILY RING/U-box 1110 1159 - -
Mupr5691g00003 1245 Pfam Ring finger domain 1112 1154 IPR001841 -
Mupr5691g00003 1245 SUPERFAMILY Zinc hairpin stack 1050 1106 IPR037275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5691g00003 Mupr-Chr5691 29481 40583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5691g00003 37 1184 C2H2 Transcription Factor Family AT3G18290 67.731 0.0 1608