Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5678g00003 CCTCTTTGGCCATGTCCATTGATTGTGTCATACCCTTTGTTGTTTTCTGACAAAGAAGATTATGTTGGCAGCAATTACGTCCACAAGGTAGAAAAAAAACACACAATTGACAGGGATAAATCGATTTTTAGAGGCAGACGTCCACGACCTGGGTTTTCTGATTCATTTTCAAATATTGGTAAACTTGCCATGAGTTTTGTTCCAATTACTTACTCTTTCATTTATTATTTTTTTTGTACTAATGCTGAAATGAATACCATATTAGAATTGGAAACTTTAGACATTGATGATGGAGGCCTACCTGATCACTCTCCTAGAAGTCATGGATCTGAAACCCCAAGTTCCAGGGCCAGCACTTCTGATTCGGAGGGTTTAACACCTGGTAACAATAACCAGTGGCGTGGTTTCTTTAAATTACTCAAGAAAGGGTCTCAAATGCCTTTCCAAACTTTTCAACCACTTAAAAATGTTCCAAAACTCACAAGAAGAAAAAGCAAGAGAATCAGGGAGGACCTCATTCCATCTCTTAATTCTCCAGCTCTTCAGTCATCTTTTGACACTGAGTTTGGCTGCTTCAAATCTTCCTGGAAAAACTTCTCTCTCGCAGAGATCCAGGCTGCAACAGATGACTTTAGCTATGAAAATTTGATTGGGGAGGGAGGCTATGCTGAGGTTTATTTAGGCAAATTGGAGGATGGAAACTTTGTTGCCATTAAAAGGTTAACAAGAGGGAACCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGCATTATAGTGCACGTGGACCACCCCAATATAGCTAGGTTGATTGGATATGGTGTTGAAGGGGGAATGTTTCTTGTTCTTCAATTGTCTCCACATGGTAGCTTGTCATCCATACTTTATGGACCTAGAGAGAAACTGAATTGGAGCATAAGATTTAAGGTTGCTTTGGGGACTGCTGACGGCCTTCGCTATCTGCATGAGGGGTGTCAAAGAAGGATCATTCACAAAGACATCAAGGCTTCTAATATTCTGCTCTCAGAGGATTTTGAACCTCAGATATCTGATTTTGGGCTTGCGAAGTGGTTGCCTGACCAATGGACTCACCATACTGTCTCCAAAGTGGAAGGCACATTCGGCTACCTTCCTCCTGAATTCTTCATGCATGGTATAGTAGATGAAAAGACAGATGTCTATGCTTATGGTGTGCTATTATTGGAGCTCATAACCGGTCGACAAGCTTTGGATAGCTCACAGAAAAGTCTGGTGATGTGGGCAAAACCTTTGTTATCTGCAAATAACATCAAAGAGCTTGTGGATCCAGTTTTGAATGATGCTTATGATGAAGAGCAGATGAAACTTGTGTTAGAGATACTAAGAGGGGAACAAGAGTGTGTGAGAATGATGAAGGAAAGGGTGAAGTCAAAACTTCAGAGGACATACTCTGAAGAACTCTTTGATGCAGAAGAGTACAACTCAACAAAGTTATTGAATGAGAGGGATCGACATATGGAGACTATTCTAGGCAGGAGCAAAGTACAGAGAAAGTTAGTTGGAAAGTGA 1551 0.4081 PLWPCPLIVSYPLLFSDKEDYVGSNYVHKVEKKHTIDRDKSIFRGRRPRPGFSDSFSNIGKLAMSFVPITYSFIYYFFCTNAEMNTILELETLDIDDGGLPDHSPRSHGSETPSSRASTSDSEGLTPGNNNQWRGFFKLLKKGSQMPFQTFQPLKNVPKLTRRKSKRIREDLIPSLNSPALQSSFDTEFGCFKSSWKNFSLAEIQAATDDFSYENLIGEGGYAEVYLGKLEDGNFVAIKRLTRGNQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLNWSIRFKVALGTADGLRYLHEGCQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLSANNIKELVDPVLNDAYDEEQMKLVLEILRGEQECVRMMKERVKSKLQRTYSEELFDAEEYNSTKLLNERDRHMETILGRSKVQRKLVGK 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5678g00003 516 SUPERFAMILY Protein kinase-like (PK-like) 196 438 IPR011009 -
Mupr5678g00003 516 SMART serkin_6 211 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5678g00003 516 MobiDBLite consensus disorder prediction 98 129 - -
Mupr5678g00003 516 Gene3D Transferase(Phosphotransferase) domain 1 288 494 - -
Mupr5678g00003 516 Pfam Protein tyrosine and serine/threonine kinase 214 419 IPR001245 GO:0004672|GO:0006468
Mupr5678g00003 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 330 342 IPR008271 GO:0004672|GO:0006468
Mupr5678g00003 516 ProSitePatterns Protein kinases ATP-binding region signature. 217 239 IPR017441 GO:0005524
Mupr5678g00003 516 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 181 285 - -
Mupr5678g00003 516 PANTHER OS08G0249100 PROTEIN 102 487 IPR046958 -
Mupr5678g00003 516 MobiDBLite consensus disorder prediction 107 129 - -
Mupr5678g00003 516 Gene3D Phosphorylase Kinase; domain 1 175 285 - -
Mupr5678g00003 516 ProSiteProfiles Protein kinase domain profile. 211 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5678g00003 516 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 288 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5678g00003 Mupr-Chr5678 26118 30377 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5678g00003 182 470 Receptor kinase-like Gene Family AT1G53420 39.535 7.45e-63 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mupr5678g00003 PK_Tyr_Ser-Thr 4.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5678g00003 - - gmx:100776081 785.793