Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5677g00001 ATGGCACTTGAGGCTGTGGTTTACCCACAAGATCCATTTGCATATGGTTGCAAGGATTATTTGTACTCTTTAGTAGGAGCAACGCCCAACTATGGTTTCCAACAAGCAGAAGAAGAGAAACTCCTCCTAGGAATCATCAATAACAACAACAACAACCTAGAACACAATCTTCATGCAAATTGGGATTCTTCTTCTACTTCCGTCTTGCAAAATGTCAAGGACCAATGGGATTCACACTCCTCCCCTGAAGCCTGCACCGTTGATCAATCTATCACCGCTCCTTTCCCTTTTCCTTTTCCTCCTTCTTCCTCCGTGGAAGCCGCCGCCGCCACCACCACCACGAGTCGCCGTAAACGACGTCGCACCAAGAGCGCCAAGAACAAAGAGGAAATCGAGAATCAGAGGATGACCCACATTGCAGTTGAACGCAACCGCCGAAAACAGATGAACGAGTACTTGGCCGTGCTCCGATCCTTGATGCCTTCTTCTTATGTTCAAAGGGGTGACCAAGCGTCGATTATTGGAGGCGCGATTAACTTTGTGAAGGAACTAGAGCAGGTTTTGCAGTCAATGGAGGGTCAAAAGAGAAGGAACCAAGCGCAGGAGAATGTTGCCTTAAATGCCTCACCACCCTTTGCTGAGTTCTTCACGTTTCCTCAATACACGACACGTGGCACGCAGAACCAGGAGCAGAAACAGTGGGCTGTAGCAGACATTGAAGTCACCATGGTGGATAGCCATGCCAATCTAAAGATACTCTCAAAGAAACAACCAGCCCAACTTATGAAGTTTGTTGTTGGCCTTCAAAGTCTCAGGCTCAGCATTCTCCACCTTAATGTCACCACTCTCCACGATATGGTCCTTTACTCAATTAGCGTCAAGGTAGAGGACGGGTGTCAGCTGAACACGGTGGATGAAATTGCGGCTGCAGTGAATCAACTATTACGCACAATTCAAGAAGTTACTTTGGACTGA 975 0.4749 MALEAVVYPQDPFAYGCKDYLYSLVGATPNYGFQQAEEEKLLLGIINNNNNNLEHNLHANWDSSSTSVLQNVKDQWDSHSSPEACTVDQSITAPFPFPFPPSSSVEAAAATTTTSRRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYVQRGDQASIIGGAINFVKELEQVLQSMEGQKRRNQAQENVALNASPPFAEFFTFPQYTTRGTQNQEQKQWAVADIEVTMVDSHANLKILSKKQPAQLMKFVVGLQSLRLSILHLNVTTLHDMVLYSISVKVEDGCQLNTVDEIAAAVNQLLRTIQEVTLD 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5677g00001 324 PANTHER MAX DIMERIZATION, MAD 75 320 - -
Mupr5677g00001 324 CDD bHLH_AtFAMA_like 136 203 - -
Mupr5677g00001 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 133 201 IPR036638 GO:0046983
Mupr5677g00001 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 133 184 IPR011598 GO:0046983
Mupr5677g00001 324 MobiDBLite consensus disorder prediction 102 129 - -
Mupr5677g00001 324 Pfam Helix-loop-helix DNA-binding domain 134 185 IPR011598 GO:0046983
Mupr5677g00001 324 SMART finulus 139 190 IPR011598 GO:0046983
Mupr5677g00001 324 Gene3D - 123 209 IPR036638 GO:0046983
Mupr5677g00001 324 Coils Coil 181 201 - -
Mupr5677g00001 324 FunFam Basic helix-loop-helix transcription factor 124 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5677g00001 Mupr-Chr5677 9433 10845 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5677g00001 1 295 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G22490 49.020 2.32e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr5677g00001 HLH 4.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5677g00001 - - gmx:100789380 479.944