LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr5675g00003	ATGGAGGATCTCGAGGAGGAAGAGAAGGGAGCGGAGGAGGTGTTGGGGTCAAGCTTGACCATGGAGAAGGTGGCGGCGGCGAAGAAGTTCATTGAGAATCACTATAGGGCTCAGATGAAGAACATCCAAGAGAGGAAGGAGAGGCGTTGGGTTTTAGAAAGGAGATTAGCATCTTCCGATGTGCCAAATGAGGAACGCATCAACCTCATTAAAGATTTAGAGAGGAAGGAGACTGAATATATGCGATTGAAAAGGCACAAGATTTGTGTTGATGATTTTGAGCTTTTGACCATCATTGGAAGGGGGGCTTTTGGGGAGGTTAGACTGTGTCGGGAGAAGAAATCTGGAAATATTTATGCTATGAAAAAGCTGAAGAAATCTGAAATGCTTAGGAGAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAACTTACTGGCTGAAGTTGCCAGTCATTGCATTGTGAAACTTTACTACTCATTTCAGGATGCTGACTACTTGTATTTAATTATGGAGTATCTGCCTGGGGGTGACGTTATGACTCTGCTGATGAGGGAAGACACCTTAAGTGAAAATGTTGCTAGATTTTACATTGCACAAAGTGTTCTAGCCATAGAATCTATTCACAAACACAATTACATTCACAGAGATATTAAACCTGATAACCTACTTCTGGATAAAAATGGTCATATGAAGCTCTCTGATTTTGGCCTCTGTAAGCCTCTCGATTGTATTGCCTTGTCTACACTGCATGAAAATCAGACCATGGATGATGAAACTTTGGCAGAACCAATGGATGTTGATGGATGTTTCCGTGATGCGGACAATCGGAGCAGCTGGAGAAGTCCACGTGAACAGCTTCAACATTGGCAGATGAACAGGAGGAAGTTG	888	0.4336	MEDLEEEEKGAEEVLGSSLTMEKVAAAKKFIENHYRAQMKNIQERKERRWVLERRLASSDVPNEERINLIKDLERKETEYMRLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLRRGQVEHVRAERNLLAEVASHCIVKLYYSFQDADYLYLIMEYLPGGDVMTLLMREDTLSENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCIALSTLHENQTMDDETLAEPMDVDGCFRDADNRSSWRSPREQLQHWQMNRRKL	296

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr5675g00003	296	FunFam	Non-specific serine/threonine protein kinase	177	244	-	-
	Mupr5675g00003	296	Pfam	Protein kinase domain	94	241	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr5675g00003	296	ProSiteProfiles	Protein kinase domain profile.	93	296	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr5675g00003	296	FunFam	Non-specific serine/threonine protein kinase	54	176	-	-
	Mupr5675g00003	296	Gene3D	Transferase(Phosphotransferase) domain 1	177	242	-	-
	Mupr5675g00003	296	SUPERFAMILY	Protein kinase-like (PK-like)	75	242	IPR011009	-
	Mupr5675g00003	296	SMART	serkin_6	93	291	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr5675g00003	296	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	212	224	IPR008271	GO:0004672\|GO:0006468
	Mupr5675g00003	296	CDD	MobB_NDR_LATS-like	27	88	-	-
	Mupr5675g00003	296	ProSitePatterns	Protein kinases ATP-binding region signature.	99	122	IPR017441	GO:0005524
	Mupr5675g00003	296	PANTHER	SERINE/THREONINE-PROTEIN KINASE	14	244	-	-
	Mupr5675g00003	296	Gene3D	Phosphorylase Kinase; domain 1	71	176	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr5675g00003	Mupr-Chr5675	35729	39105	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr5675g00003	1	296	AGC Kinase Gene Family	AT4G33080	83.838	0.0	518

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_NDR	Mupr5675g00003		Pkinase	1.4e-43	CL0016