Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5669g00003 ATGAAGAGGATGGAAAATGATGACAATGTTGACCTTAATAATCAAAACAACTGGTTGGGTTTCTCACTCTCTCCTCAAATGCATATAGGAGTTCCTTCACATCACTCCCAACCTTCCTCTGCTGCTGAAGTGGTTCCTACAACCTTTTACCATGCTGCTCCTCTTAATAACTATGGCTTCTACTATGGACTTGAAGCTGAGAATGTTGGATTGTATTCGGCCCTGCCTGTCATGCCTCTCAAATCTGATGGCTCTCTCTATGGAATGGAAGCTCTTGGCAGGTCACAAGCACAAGCAATGGCTACAACTTCAACTCCAAAACTGGAGAATTTCTTAGGTGGCGAAGCGATGGGGACCCCTCACTATGAATGCAGTGCCACAGAAACAATGCCTCTGAGCTTAGACAGTGTGTTTTACAACCAACCCTCACGCCGTGACCTAAACAACCCAACTTACCAACACATTAGCACCCAACAGCAACAGCAAGAGTTTCACACCCAACATTTGTCATATTACTCTACCTTGAGAAACCATGATATGATGTTAGAAGGGTCCAAGCAAAGCCAAACTTCAGATAGCAATCTTCACATTCCAAACATGGGTGAGGATGGAGTTTCTGGCCTTAAGAGCTGGGGAGTAAGGAACTTCCAAGCTAGCCATGCACAGGAGTCAAAGATGATTGTTCCTGTGGAGGAAAATGGAGGTGAATCAGGGTCCATTGGATCAATGGCTTATGGGGATTTGCAGTCTTTAAGCTTATCCATGAGTCCTAGCTCACAGTCTAGCTGTGTTACAAGTTCACTCCGTGCATCATCTGCTGTCATTGATTCTGTTGCCATGGATACAAAGAAAAGAGGACCTGAAAAGGTTGACCAGAAGCAAATTATTCATAGGAAGTCCATTGACACCTTTGGACAAAGAACCTCCCAATATAGAGGTGTAACAAGGCATAGGTGGACTGGGAGATATGAAGCTCATCTATGGGACAACAGCTGCAAGAAAGAAGGCCAAAGCAGGAAAGGAAGACAAGGGGGTTATGATATGGAAGAAAAAGCTGCGAGAGCTTATGATCTGGCCGCACTCAAGTATTGGGGACCCTCCACTCACATAAACTTCCCTTTGGAAAATTATCAAAATGAACTTGAGGAAATGAAGAACATGACCAGACAGGAATATGTTGCTCACTTACGAAGAAAAAGCAGTGGATTCTCAAGAGGGGCTTCCATGTACAGAGGAGTAACAAGACACCACCAACATGGAAGGTGGCAAGCTCGGATTGGTAGAGTGGCTGGAAACAAAGATCTATATCTTGGAACTTTCAGTACCCAAGAGGAAGCAGCTGAAGCCTACGACATTGCTGCTATAAAATTCCGAGGAGTGAATGCTGTGACCAACTTTGACATAACAAAATATGATGTGGAGAAAATCATGGCAAGCAGCAACCTTCTTAGCAGTGACCTAGCTAGGCGCAACAGAGAGGCAGAGAGTGGAACTCAGTATATTGACCATAATCATAATAAGCCCTCTGCATATGATGACACTCAAGAAGCTATTCTGATGCAGAAGAGCTGTGAAAGCCAAAATGATCAGTGGAAGATGGTTCTCTATCAATCCTCTCAGCAACTTGACCAGAATCCACCAAGAATTGAGAGTGATGGAACTAACCAGTCCTTCTCAGTGGCTATGGACAACATGTTCCATCAAGAAGTAGAGGAATCAAGTAAGGTGAGAACGCATGTGTCATATCCTTCTTCATTGGCCACAAGTTTAAACAGCTCAAGAGAAGGTAGCCCTGATAGGACAAGCTTGCCAATGCTCTCTGGAATGCCTTCAACTGCGTCCAAACTAATGGCTACTAATCCAAATAACGTGAATTCTTGGGACCCTTCACCCCATTTGAGGCCTGCTCTTTCTTTGCCTCAGATGCCAGTTTTTGCTGCTTGGACAGATGCATAG 1956 0.4443 MKRMENDDNVDLNNQNNWLGFSLSPQMHIGVPSHHSQPSSAAEVVPTTFYHAAPLNNYGFYYGLEAENVGLYSALPVMPLKSDGSLYGMEALGRSQAQAMATTSTPKLENFLGGEAMGTPHYECSATETMPLSLDSVFYNQPSRRDLNNPTYQHISTQQQQQEFHTQHLSYYSTLRNHDMMLEGSKQSQTSDSNLHIPNMGEDGVSGLKSWGVRNFQASHAQESKMIVPVEENGGESGSIGSMAYGDLQSLSLSMSPSSQSSCVTSSLRASSAVIDSVAMDTKKRGPEKVDQKQIIHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITKYDVEKIMASSNLLSSDLARRNREAESGTQYIDHNHNKPSAYDDTQEAILMQKSCESQNDQWKMVLYQSSQQLDQNPPRIESDGTNQSFSVAMDNMFHQEVEESSKVRTHVSYPSSLATSLNSSREGSPDRTSLPMLSGMPSTASKLMATNPNNVNSWDPSPHLRPALSLPQMPVFAAWTDA 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5669g00003 651 CDD AP2 309 373 IPR001471 GO:0003700|GO:0006355
Mupr5669g00003 651 FunFam AP2-like ethylene-responsive transcription factor 408 469 - -
Mupr5669g00003 651 SUPERFAMILY DNA-binding domain 309 375 IPR016177 GO:0003677
Mupr5669g00003 651 Gene3D AP2/ERF domain 409 469 IPR036955 GO:0003700|GO:0006355
Mupr5669g00003 651 Gene3D AP2/ERF domain 309 375 IPR036955 GO:0003700|GO:0006355
Mupr5669g00003 651 MobiDBLite consensus disorder prediction 577 604 - -
Mupr5669g00003 651 MobiDBLite consensus disorder prediction 574 604 - -
Mupr5669g00003 651 CDD AP2 408 469 IPR001471 GO:0003700|GO:0006355
Mupr5669g00003 651 SUPERFAMILY DNA-binding domain 408 468 IPR016177 GO:0003677
Mupr5669g00003 651 ProSiteProfiles AP2/ERF domain profile. 409 467 IPR001471 GO:0003700|GO:0006355
Mupr5669g00003 651 PRINTS Ethylene responsive element binding protein signature 311 322 IPR001471 GO:0003700|GO:0006355
Mupr5669g00003 651 PRINTS Ethylene responsive element binding protein signature 449 469 IPR001471 GO:0003700|GO:0006355
Mupr5669g00003 651 Pfam AP2 domain 410 459 IPR001471 GO:0003700|GO:0006355
Mupr5669g00003 651 Pfam AP2 domain 310 365 IPR001471 GO:0003700|GO:0006355
Mupr5669g00003 651 Coils Coil 374 394 - -
Mupr5669g00003 651 SMART rav1_2 409 473 IPR001471 GO:0003700|GO:0006355
Mupr5669g00003 651 SMART rav1_2 310 379 IPR001471 GO:0003700|GO:0006355
Mupr5669g00003 651 FunFam AP2-like ethylene-responsive transcription factor ANT 309 375 - -
Mupr5669g00003 651 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 105 547 - -
Mupr5669g00003 651 ProSiteProfiles AP2/ERF domain profile. 310 373 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5669g00003 Mupr-Chr5669 21924 25400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5669g00003 390 651 AP2-EREBP Transcription Factor Family AT4G37750 26.384 3.44e-16 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mupr5669g00003 AP2 4.3e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5669g00003 K09285 - gmx:100787611 1093.57