Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5666g00002 ATGGGTTACGAAGACGATCAGTACCGCGACGAGGACGGAGAGCCTCTCATGGATTTCTACAACGTTCAATCCGACCGCGAGCCCTCTCCGCAGGCGCACCACCTCGACGATTTCGAGGAGGACGTCGACGATTGGCGCGGCCGCGATCGCTCTCAGACTCCGGTGTTCGATACCGATCCGGGGCGGTCCAAGCCGCGGAAGAGGCTCATCAAGAAGAGCGACGCCGGGAAGCGGTCGGTGGCGCCGGAGCTTGAGGACGAGGAGGAGGGGTATGTTCCGGCGAGGTCTGATGACGGGGAAGGGAGGAAGAGGAAAAGAGGGAAGGAGAGAGGGAGCGGAAAGAAGGAGAAGAGGTTAAAGGGGGGGAAGAAGAGGTTTGGGAGTGACGGTGGTAAAGGTGGGTCCAAATTTGGGGGTTCCAAGAAAGGGTTCGGAGGGAAGGCGGGGAAGGATCATGATGGTGAAGTTAAGGAGATGTGGGATACAATTGCTGGTGGAGATTCTGAGGATGATCATGAGGGTGACAGGAATGTGGATGATGACAACTTTATAGATGACACTGGAGTGGAACCTGCTTATTATGGTAGTGATGAACCACGTTGTCCTGGTGATGCTCCCCAGGCGGAGGAAGGTGAAGAGGATGATGAAATCAAGGATCTTTTCAAGATAGGTAAGAAAAAGAAGAAGAATGAGAGAAATCCTGCTGAAATAGCTTTATCAATTGAGAATGTCATGGCTGAGCTGGAGGTTACGGCTGAGGAGGATGCTGACCTTAATAGACAGGGAAAACCTGCCATTAATAAACTCAAGAAGTTAACTCTTCTTACAGAAGTCCTCTCAAAGAAACAACTTCAACTAGAGTTTTTAGATCATGGGGTGCTAACCTTATTGAAGAATTGGCTTGAGCCGCTCCCTGACGGAAGTTTGCCAAATATAAATATACGCATGGAAATTTTGAGGATTTTGAATGATTTTCCTATAGACCTAGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGCCTTGGGAAGGTAATTATGTTTTTATCAAAGTCCGATGAAGAAATCAATGTAAATAGGAAACTAGCCAAGGAGCTGGTTGATAAGTGGAGCCGACCTATATTTAATAAGAGTACTCGGTTTGAAGACATGAGAAATGTGGAGGATGATAGGGTTCCTTTTAGGAGATCACTAGTTAAAAAGCTGGCAAATAAAGCTGCAGGAATCGGATCTAGAGATAGTGATCTTGATTTGGAAATTTCACAGCCTAGGGCTGGACAGTCTTCTTCTAGGCAGTTTACATTAAGGCCAGAAGCAACACCTTTGGATTTTGTGATCCGTCCCCAATCTAAAATTGATCCAGAAGAAGTTAGAGCGCGAGTAAAACAAGCTGCACAAGATCAGCAGCAGCGTATGAAGATGAATAAGAAATTGCAACAATTAAGGGCACAAAAAAAGAAGCAGCTCCAGGCTACAAAACTGAGTGTGGAAGGTCGTGGTATG 1506 0.4695 MGYEDDQYRDEDGEPLMDFYNVQSDREPSPQAHHLDDFEEDVDDWRGRDRSQTPVFDTDPGRSKPRKRLIKKSDAGKRSVAPELEDEEEGYVPARSDDGEGRKRKRGKERGSGKKEKRLKGGKKRFGSDGGKGGSKFGGSKKGFGGKAGKDHDGEVKEMWDTIAGGDSEDDHEGDRNVDDDNFIDDTGVEPAYYGSDEPRCPGDAPQAEEGEEDDEIKDLFKIGKKKKKNERNPAEIALSIENVMAELEVTAEEDADLNRQGKPAINKLKKLTLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRMEILRILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEINVNRKLAKELVDKWSRPIFNKSTRFEDMRNVEDDRVPFRRSLVKKLANKAAGIGSRDSDLDLEISQPRAGQSSSRQFTLRPEATPLDFVIRPQSKIDPEEVRARVKQAAQDQQQRMKMNKKLQQLRAQKKKQLQATKLSVEGRGM 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5666g00002 502 Coils Coil 465 496 - -
Mupr5666g00002 502 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 233 381 IPR035441 -
Mupr5666g00002 502 MobiDBLite consensus disorder prediction 145 183 - -
Mupr5666g00002 502 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 290 378 IPR035441 -
Mupr5666g00002 502 PANTHER PROTEIN IWS1 HOMOLOG 1 1 502 IPR044204 GO:0009742|GO:0032784
Mupr5666g00002 502 MobiDBLite consensus disorder prediction 29 64 - -
Mupr5666g00002 502 Pfam TFIIS helical bundle-like domain 322 375 IPR017923 -
Mupr5666g00002 502 MobiDBLite consensus disorder prediction 107 121 - -
Mupr5666g00002 502 MobiDBLite consensus disorder prediction 74 106 - -
Mupr5666g00002 502 ProSiteProfiles TFIIS N-terminal domain profile. 295 378 IPR017923 -
Mupr5666g00002 502 MobiDBLite consensus disorder prediction 1 215 - -
Mupr5666g00002 502 Coils Coil 241 261 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mupr5666g00002 Med26 3.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5666g00002 K17498 - gmx:100801805 736.487