Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5665g00003 ATGGAGATTCACTACAGTAGCAGCTACTTCGAAAGACGCCCCATCCTCAAGTCCAAGGCTCCCGCAGTTAAATGGGTTAGAGAATGGGTTCCCCAAGATCTTGTAACAACGGGAGGGAAGTGCATGCTCTTAAAATGGGTAACAGAGGATACCTTGAAGACCTTGAAAGAAAAGGAAAAAGAGCCATCAGTGCCTGAGCCAGAGCCAGAGCCAACTACTGAAGTACTTTTTCTTTGCAGCTATGATGGCTGTGGAAAGACATTCATAGATGCTGGTGCATTGAGGAAGCATTCTCACATCCATGGAGAGAGGCAATATGTTTGTCACTATGAGGGATGTGGAAAGAAATTTCTAGATAGCTCAAAGTTGAAAAGACATTTTCTCATTCATACAGGAGAGAGGGATTTTGTGTGTCCTCATGAAGGCTGTGGTAAGGCCTTCTCCCTGGATTTCAACTTAAGGTCTCACATGAAAACACATTCCCAAGAGAACTATCATATCTGCCCATACCCAGATTGTGGAAAGAGATATGCTCACGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAGAATGCACCCGTGGATGTGACTGTGACAAAGTACACTCCACCTTCAGAGAAGCAAACAAAACCTACTAAACCTTCTGGGGGGGCATATGGTTCTGCTTCATCTGATCGACCTTATGCATGTCCTTATGACGGGTGTGAAAAGGCATACATCCATGAATACAAGCTTAGGCTCCATTTGAAGAGGGAGCACCCGGGGGAGCTTATGCCTGATGAAAATGCAGAGCATGCTCATGCTAACGCTGACAATGAAATGGATGAAGCAAGTGACCAAGATGCCTATGTTGGGAAACGGTCAAATGGTAAAATTCAGAAGCAAAGTAAGCCTAAACCAAGCCTCAAGTTGCCTCCTTCCAAAATTGCAAAACGCAAAGTGTCCGCCACTCCCACATTAACTGTAAATAAAAATTCTTGGCCCGTGAAAGATGAACCTTACGATGAAGAAGATAGTGAAGAAACAGAAGAGGATCGTGACAATGTTGAAGATGGTTGGAGATATGCAGGAGGAAACAATGAAGATGATGATGAAGAAACAGAATATGAAGACTGA 1125 0.4347 MEIHYSSSYFERRPILKSKAPAVKWVREWVPQDLVTTGGKCMLLKWVTEDTLKTLKEKEKEPSVPEPEPEPTTEVLFLCSYDGCGKTFIDAGALRKHSHIHGERQYVCHYEGCGKKFLDSSKLKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAPVDVTVTKYTPPSEKQTKPTKPSGGAYGSASSDRPYACPYDGCEKAYIHEYKLRLHLKREHPGELMPDENAEHAHANADNEMDEASDQDAYVGKRSNGKIQKQSKPKPSLKLPPSKIAKRKVSATPTLTVNKNSWPVKDEPYDEEDSEETEEDRDNVEDGWRYAGGNNEDDDEETEYED 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5665g00003 374 FunFam Zinc finger transcription factor YY1 206 274 - -
Mupr5665g00003 374 Coils Coil 263 283 - -
Mupr5665g00003 374 MobiDBLite consensus disorder prediction 336 350 - -
Mupr5665g00003 374 SUPERFAMILY beta-beta-alpha zinc fingers 117 169 IPR036236 -
Mupr5665g00003 374 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 135 IPR013087 -
Mupr5665g00003 374 ProSiteProfiles Zinc finger C2H2 type domain profile. 136 165 IPR013087 -
Mupr5665g00003 374 ProSitePatterns Zinc finger C2H2 type domain signature. 79 101 IPR013087 -
Mupr5665g00003 374 SMART c2h2final6 136 160 IPR013087 -
Mupr5665g00003 374 SMART c2h2final6 77 101 IPR013087 -
Mupr5665g00003 374 SMART c2h2final6 166 190 IPR013087 -
Mupr5665g00003 374 SMART c2h2final6 231 256 IPR013087 -
Mupr5665g00003 374 SMART c2h2final6 106 130 IPR013087 -
Mupr5665g00003 374 MobiDBLite consensus disorder prediction 204 222 - -
Mupr5665g00003 374 MobiDBLite consensus disorder prediction 275 374 - -
Mupr5665g00003 374 PANTHER TRANSCRIPTIONAL REPRESSOR PROTEIN YY 18 347 - -
Mupr5665g00003 374 FunFam zinc finger transcription factor YY1 163 194 - -
Mupr5665g00003 374 ProSiteProfiles Zinc finger C2H2 type domain profile. 166 196 IPR013087 -
Mupr5665g00003 374 FunFam Putative zinc finger protein 143 103 133 - -
Mupr5665g00003 374 Gene3D Classic Zinc Finger 77 102 - -
Mupr5665g00003 374 Gene3D Classic Zinc Finger 134 161 - -
Mupr5665g00003 374 ProSitePatterns Zinc finger C2H2 type domain signature. 108 130 IPR013087 -
Mupr5665g00003 374 Gene3D Classic Zinc Finger 205 275 - -
Mupr5665g00003 374 Gene3D Classic Zinc Finger 163 195 - -
Mupr5665g00003 374 Gene3D Classic Zinc Finger 103 133 - -
Mupr5665g00003 374 FunFam Zinc finger protein 410 134 161 - -
Mupr5665g00003 374 Pfam Zinc finger, C2H2 type 166 190 IPR013087 -
Mupr5665g00003 374 Pfam Zinc finger, C2H2 type 136 160 IPR013087 -
Mupr5665g00003 374 ProSitePatterns Zinc finger C2H2 type domain signature. 168 191 IPR013087 -
Mupr5665g00003 374 ProSitePatterns Zinc finger C2H2 type domain signature. 233 256 IPR013087 -
Mupr5665g00003 374 ProSitePatterns Zinc finger C2H2 type domain signature. 138 160 IPR013087 -
Mupr5665g00003 374 FunFam zinc finger transcription factor YY1 77 102 - -
Mupr5665g00003 374 SUPERFAMILY beta-beta-alpha zinc fingers 226 254 IPR036236 -
Mupr5665g00003 374 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 106 IPR013087 -
Mupr5665g00003 374 ProSiteProfiles Zinc finger C2H2 type domain profile. 231 261 IPR013087 -
Mupr5665g00003 374 MobiDBLite consensus disorder prediction 204 228 - -
Mupr5665g00003 374 SUPERFAMILY beta-beta-alpha zinc fingers 80 130 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5665g00003 10 359 C2H2 Transcription Factor Family AT4G06634 64.674 3.27e-141 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr5665g00003 zf-C2H2 0.0089 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5665g00003 - - gmx:100785164 631.713