Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr565g00013 ATGGAGTGGAATGCGAAATCTCTTGGGCAATGGGACTGGGAGCACTTATTCTTCTTCAATACAAAAGCAACAGAAAATCCCAGGTTTCAACAAACTGATTGTGGCGGTGAAGCAGATCGAGAAATCAATGTGGGGGTGTTGTATCCATCAGGTGGTAGTGCTTGTTCCGGCTCTGAACTAATACACGCATCTTCGTCAAGGAGCTCAAAATCAGCTTCCAACAATTCATCATCGAACGGGGATAGCAAGGTGTCTATATTGACTCTGGAAGGTTCTCAGGATGATTCCACTGGGAAGAAAGAATTGTGCAATGGAGAGCCAGTTGAAACTTCTCCAGCAGCAGTGCCCTCTCCTGTCTCTGGTGAACCATTGCTCACTCTTAAGCTCGGCAAACGATTGTACTTTGAGGATGTTTGCACAGCAAGTGATTCCAAGAAAACATCTTCCTTTGAGGCCCCCATTTCATCAGGAAAGAAATGCAAAACCAGTAGTCAGAATTTCCAGCATCCAAGCTGCCAGGTTGAAGGCTGTGGCCTTGACCTCTCATCTGCCAAAGATTACCATCGCAAACACAGAGTTTGTGAAACTCATTCCAAATCCCCTAGGGTGGTTATAGCTGGTTTGGAACGTCGATTTTGCCAGCAATGTAGCAGGTTCCATGCTCTATCAGAGTTTGATGACAAAAAAAGAAGCTGCAGACGACGTCTTTCAGATCACAATGCAAGGCGCCGCAAACCTCAGCCTGACGCAATTCAATTAAATCCATCAGCTTTGTCTTCATCACCCTATGGTATAACAGGAACATTCCCCTCCCTTGGTTTAGTTTTGCATGATCAACTTGGTGAACGAGCAGTAAAACTTGATACTATAACTGTATCTAAGTATGTTGAGTTTGCAGATGGGAGGCAAATGATGAGCCCATTTGGATTTTCAAGGAGTGCCACAAATATAGCATGGCAAGACATGCAGAGCAACAAGCTCCCCCAGACAAAAGATTTTCTGCCGAAGCCTGCAAGTATTGTGTCTATGCTTTCAGATGAGTCCAGTGGCCTTGTAACAGCTGTTCCAGGTATAGAAGATCCCATTACTTCGTGTGATCCAAATGGTACACAAGATGTTAACCGTGCTCTCTCTCTTCTGTCAACCAATTCATGGGGTGCATATGAGCCAAAGACCCTTTCACTGGAACACTCAACTATACCTTCGACTGAATATTGGCACACTGATCAACAACCGCCACCATCGGCCATGTGTATCTCATTCTCGGATTCTGATAGTAGCAACCGCTTTCAGGACTTTCACCTGTTGAGCGCACCACCCTATGAATCAGCTTTTCCTTGCAATCAACTGGAT 1353 0.4516 MEWNAKSLGQWDWEHLFFFNTKATENPRFQQTDCGGEADREINVGVLYPSGGSACSGSELIHASSSRSSKSASNNSSSNGDSKVSILTLEGSQDDSTGKKELCNGEPVETSPAAVPSPVSGEPLLTLKLGKRLYFEDVCTASDSKKTSSFEAPISSGKKCKTSSQNFQHPSCQVEGCGLDLSSAKDYHRKHRVCETHSKSPRVVIAGLERRFCQQCSRFHALSEFDDKKRSCRRRLSDHNARRRKPQPDAIQLNPSALSSSPYGITGTFPSLGLVLHDQLGERAVKLDTITVSKYVEFADGRQMMSPFGFSRSATNIAWQDMQSNKLPQTKDFLPKPASIVSMLSDESSGLVTAVPGIEDPITSCDPNGTQDVNRALSLLSTNSWGAYEPKTLSLEHSTIPSTEYWHTDQQPPPSAMCISFSDSDSSNRFQDFHLLSAPPYESAFPCNQLD 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr565g00013 451 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 59 417 IPR044817 GO:0003677
Mupr565g00013 451 Gene3D - 162 233 IPR036893 GO:0003677|GO:0005634
Mupr565g00013 451 MobiDBLite consensus disorder prediction 236 257 - -
Mupr565g00013 451 Pfam SBP domain 172 245 IPR004333 GO:0003677
Mupr565g00013 451 MobiDBLite consensus disorder prediction 91 121 - -
Mupr565g00013 451 ProSiteProfiles Zinc finger SBP-type profile. 169 246 IPR004333 GO:0003677
Mupr565g00013 451 SUPERFAMILY SBT domain 170 251 IPR036893 GO:0003677|GO:0005634
Mupr565g00013 451 FunFam Squamosa promoter-binding-like protein 14 163 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr565g00013 Mupr-Chr565 103309 105717 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr565g00013 1 248 SBP-box Gene Family AT5G43270 47.082 1.86e-56 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mupr565g00013 SBP 7e-32 No_clan