Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5655g00002 ATGTTCTTACTCTTCTCTTGCTACTCTTCCTTCATGGTGCACGTTGGAACTGATTTTCTCCAACCCATTTTCGCACGAGGGGTATCTGCTTCACTCCATCTAGTCTTGTTACTTGTGCTTCTTGTGTCTTGGGAATGGAAGAAAGTGCAAGTGGACCATAGAGAAAAGAGTGAAAGAAAAGGATTCCATAAATCTGGTTTCTTGAGCTACAAACACATTCTAGTTTGTAGGTTAGTTATTTGTGTGTTCAACCTTGTGTTGTGCTTACTAAGCTACTTTTACTTGTATAAACATGATGATCCAGAGGAGGTTGTTGCACTTTCTGATTTGGCTCTCAAAACAGTTGTTTGGGGTGCTGTTTGTGCTTATTTACAATCTAGAAACTCCAAGGCACATGATCCGAGTTTCTCGTCTTTGTTGAGAATTTGGTGCTGGGTCTATGCCTTTGTTTCTTGTTCTGGCCTTGTTGTTGACTTTGGAGACTATGGAAAGCATGTTTTCTTCCCAATCATATACCTTGTTTTGGATATTGCTTTTCTTGTTATTGTATACTTTGTTAACAACATGGCTAAGCTTGCCCTTCTGAATGGTAATACTAGTGTGAGCAAGAATTCTGAACCCAGTAAGGTTAGAGGAAATGAAAATTTATCCCGTTATTCAAATGCTGGAATTTTCAGCATTCTTACTTTCTCATGGATTGGTCCATTAATAACTCTAGGCAATGAGAAGACTTTAGACCATGAGGACCTCCCACTTCTTGCTACTGATGACAGTGCATATGAGGTTTTTCCAACTTTTAGAAACAAACTTGAGGCAGAGTGTGGTAGTGTTAGAAATGTGACCACTCTTAAGCTGGTGAAGGTGTTATTCCTGTCAACATGGAAAGGGATCCTTTTATCAGGTATATTTGCATTCCTATACATATGTGCTTCTTATGTTGGACCCTTTCTTATTGACATCCTTGTTCAATACCTCAATGGGGAACACAAGTTTAAAAATGAAGACTATGTTTTGGCTATGGCATTTGTTGCTGCAAAGCTTGTGGAGTGTCTTTCACACAGGCACTGGATGTTTAGGTACCAGCAGGTTGGGGTTAGGATGGAATCAAAGTTGGTGGCAATGATTTATGCTAAAGGTTTGACTCTTTCATGTCGATCAAAGGAGGTTTATAGCACTGGGGAAATCATCAACTTAATGACTGCTGATGCTGCAAGGATTGGTGAATTTGGTTTGTACATGCATGATCCATGGATGTGTGTTTTGCAAGTTGCTTTGGCCTTGTTAATTCTCTATAGAAGTGTAGGGGTTGCTTCAATAGCTGCTCTTGCTGCCACTGTATTTGTGATGTTGCTAAACCTTCCTGTGGTATCATTGCAAGAAAAGTTCCAAGGCAAGGTACTGGAGTCCAAGGGTAAAAGAATGAAGGCTATGTCTGAGATTCTGAAGAATATGAGGATTCTAAAACTGCAAGCATGGGAGATGAAGTTCTTATCAAAGATTACTCAGCTTAGGAAGACTGAGGAGATATGGCTAAAGAAATTTCTAGTTGGTTCAACAATATTTAGATTTCTCTTCCATAACGCCCCAACTTTTATTGCTGTGGTTACGTTTGGTGCTTGTGTTTTTATGAGAATCCCACTTGAATCAGGGAAGGTCTTATCTGCACTTGCAACATTCCGAATTCTTCAAAATCCCATATATAATCTTCCTGACACGATTTCAATGATTGCACAAACTAAGGTTTCCCTTGAAAGGATTGCATCATTTCTTTGTCTAGACGAGTTGAAGACTGATGTGGTAGAGAGGCTTCCATGGCGTAGTTCTGATAAGGCAATTGAATTAGTTGATGGGAATTTCTCTTGGGATTTATCTTCACCTAATACAACATTGAAAAACATAAATCTCACAGTTTCTCATGGTATGAAGGTTGCTGTATGTGGTACTGTTGGATCAGGCAAGTCTAGTTTACTTTCTTGTATAATAGGGGAAGTACCAAAGATATCTGGGACCCTGAAGATATGTGGAACAAAGGCTTATGTTTCCCAATCACCATGGATACAGAGTGGCAAGATAGAAGACAACATATTATTTGGCAAAGAGATGGACAGGAAAAAGTATGAGAAGGTGCTAGAAGCATGTTCCTTGAGAAAAGACCTTGAGGTTCTACCATTTGGAGATCAGACCATTATTGGAGAGAAGGGGATCAATTTGAGTGGTGGACAGAAGCAAAGAGTGCAAATAGCCCGAGCTCTATACCAAGATGCTGATATATATCTGTTTGATGATCCCTTCAGTGCTGTGGATGCTCATACAGGATCTCATCTCTTTAAGGTCATTAGAGAAGGAAGGATAACTCAATCAGGAAAATACAATGACATTCTCATGTCAGGCACTGATTTTATGGAACTTGTAGGTGCACACAGAGCAGCCTTGTCTTCAATCAAGTCCTTAGAGGGAAGATCAACATTTAAAACATTTATAACCAAGGACACAAATTCATTAAGTGATTTTGAACTTGAACAAAATGTGGAAAACATATATGACCAGAATGGTAAGTCAGATGACACAGTTGAGCCCAAAGGACAACTTGTTCAAGAAGAAGAACGGGAAAAGGGTAGAGTTGGGTTTAAAGTCTACTGGAAATACATCACAACAGCTTATGGAGGAGCTCTTGTACCCTTCATAATACTTTCAACGACACTCACGGTGGCTTTTCAGATTGCAAGCAATTATTGGATGACTGTGGCAACTCCTGTTTCAGCAACCTCAGAACCTGATACTGGAAGCCTTACACTTATGGTTGTCTGTGTTGCTTTGGCAATTGGAAGTTCCATTTTCACCTTTGCTAGAACATTTCTTGTTGTGTTAGAGGGATACAAGACAGCCACCGTGCTCTTCACTAAAATGCATTTGAGTGTTTTTCGAGCACCAATATCATTTTTTGATGCCACCCCAAGTGGGCGAATCCTTAATAGAGCTTCAGCAGACCAAAGGGCACTAGATAAGAACATTTCAAATCTAGTATGGGCGGTTACCCTCTATCTGGTTCAACTCTTGGGAAATATTGTTGTGATGTCTCAAGCTGCATGGGAGGTGATTATAGTATGGATTCCTGTCATGGCAGCATGCATGTGGTACCAGCGATACTATTCTGCATCAGCAAGGGAATTAGCACGATTAGTTGGTACATGCCAAGCTCCAGTTATACAACATTTTTCCGAAACAATTTCTGGATCAACAACCATAAGAAGTTTTGATCAAGAATCAAGATTTAATGACATAAATATGAAATTGATAGACAGATATTCCCAACCCAAATTATACAGTGCTGCTGTAATTGAATGGCTGAATTTCAGATTGGATATTTTATGCACTCTCACATTTGCCTTCTGTTTGGTTTTCTTGATATCTTTTCCAAATTCAATGACTGGTCCTGGCATTGCGGGATTGGCTGTGACATATGGACTTAATCTAAACACACTACAATTTAATATAATCTGGTTTCTTTGCAATTTGGAGAACAAAATTATATCTGTTGAAAGAATACTCCAGTTCACATCCCTTCCAAGCGAGGCTCCTCTTGTGATAAAAGACAACCAACCGGATTATTCTTGGCCATCATTTGGAGAGGTTCATATCCAGGAATTACAGGTTCGATATGCTCCTCACTTGCCTATTGTTTTACGAGGACTTACTTGCACTTTCACTGCTGGAGCAAAAACTGGAATTGTGGGAAGAACAGGAAGTGGAAAATCAACTCTAGTGCAAGCACTTTTCCGACTTATTGAACCTGTTGCTGGACAAATATTGATAGATAGCATTAATATCTCTTTGATTGGAATTCATGATTTGCGGTCCAGACTAAGTATTATTCCTCAAGATCCAACAATGTTTGAAGGGACTGTAAGAACCAACCTGGACCCACTGGAAGAGTACACAAATGAACAGATTTGGGAGGCTCTAGATATGTGCCAACTTGGAGATGAAGTAAGGAAAAAAGAAGGGAAGCTTGACTCCATAGTTACTGAGAATGGAGAAAATTGGAGTATGGGTCAAAGGCAATTGATCTGCCTTGGCCGTGTTCTACTTAAGAAAAGCAAGATTTTGGTGCTTGATGAAGCCACTGCATCAGTTGATACAGCCACAGATAATATTATTCAGCAAACAATTAAGCAACATTTTTCAGAATGCACAGTCATTACCATTGCTCATAGGATAACTTCAATCATCGATTGTGACATGGTTCTGTTTTTAAATCAAGGGTTGATTGAGGAATACGATTCACCAAAGAAACTACTTAAGAACAAATCTTCATCTCTAGCTCAACTAGTTGCAGAATACACAAGGAGATCAAACTCTGAATGTATACATGGTGAGTGTACCCCTTCCATTGAAGGTGGAGGTGTCACATCAGATGTCCTAGCAGGTGGATCAGAAGGACGAGATATTGTATGTGATGAAGCAGATTGTGGATTTCGAGAGATTATGGCGAGAGGACCCAAAAAATCTGCCATATACATATACGGTGGATGGCATGACGGCATATAG 4548 0.3964 MFLLFSCYSSFMVHVGTDFLQPIFARGVSASLHLVLLLVLLVSWEWKKVQVDHREKSERKGFHKSGFLSYKHILVCRLVICVFNLVLCLLSYFYLYKHDDPEEVVALSDLALKTVVWGAVCAYLQSRNSKAHDPSFSSLLRIWCWVYAFVSCSGLVVDFGDYGKHVFFPIIYLVLDIAFLVIVYFVNNMAKLALLNGNTSVSKNSEPSKVRGNENLSRYSNAGIFSILTFSWIGPLITLGNEKTLDHEDLPLLATDDSAYEVFPTFRNKLEAECGSVRNVTTLKLVKVLFLSTWKGILLSGIFAFLYICASYVGPFLIDILVQYLNGEHKFKNEDYVLAMAFVAAKLVECLSHRHWMFRYQQVGVRMESKLVAMIYAKGLTLSCRSKEVYSTGEIINLMTADAARIGEFGLYMHDPWMCVLQVALALLILYRSVGVASIAALAATVFVMLLNLPVVSLQEKFQGKVLESKGKRMKAMSEILKNMRILKLQAWEMKFLSKITQLRKTEEIWLKKFLVGSTIFRFLFHNAPTFIAVVTFGACVFMRIPLESGKVLSALATFRILQNPIYNLPDTISMIAQTKVSLERIASFLCLDELKTDVVERLPWRSSDKAIELVDGNFSWDLSSPNTTLKNINLTVSHGMKVAVCGTVGSGKSSLLSCIIGEVPKISGTLKICGTKAYVSQSPWIQSGKIEDNILFGKEMDRKKYEKVLEACSLRKDLEVLPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLFDDPFSAVDAHTGSHLFKVIREGRITQSGKYNDILMSGTDFMELVGAHRAALSSIKSLEGRSTFKTFITKDTNSLSDFELEQNVENIYDQNGKSDDTVEPKGQLVQEEEREKGRVGFKVYWKYITTAYGGALVPFIILSTTLTVAFQIASNYWMTVATPVSATSEPDTGSLTLMVVCVALAIGSSIFTFARTFLVVLEGYKTATVLFTKMHLSVFRAPISFFDATPSGRILNRASADQRALDKNISNLVWAVTLYLVQLLGNIVVMSQAAWEVIIVWIPVMAACMWYQRYYSASARELARLVGTCQAPVIQHFSETISGSTTIRSFDQESRFNDINMKLIDRYSQPKLYSAAVIEWLNFRLDILCTLTFAFCLVFLISFPNSMTGPGIAGLAVTYGLNLNTLQFNIIWFLCNLENKIISVERILQFTSLPSEAPLVIKDNQPDYSWPSFGEVHIQELQVRYAPHLPIVLRGLTCTFTAGAKTGIVGRTGSGKSTLVQALFRLIEPVAGQILIDSINISLIGIHDLRSRLSIIPQDPTMFEGTVRTNLDPLEEYTNEQIWEALDMCQLGDEVRKKEGKLDSIVTENGENWSMGQRQLICLGRVLLKKSKILVLDEATASVDTATDNIIQQTIKQHFSECTVITIAHRITSIIDCDMVLFLNQGLIEEYDSPKKLLKNKSSSLAQLVAEYTRRSNSECIHGECTPSIEGGGVTSDVLAGGSEGRDIVCDEADCGFREIMARGPKKSAIYIYGGWHDGI 1515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5655g00002 1515 FunFam ABC transporter C family member 3 1194 1446 - -
Mupr5655g00002 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 606 805 IPR027417 -
Mupr5655g00002 1515 ProSitePatterns ABC transporters family signature. 737 751 IPR017871 GO:0005524|GO:0016887
Mupr5655g00002 1515 Gene3D - 596 818 IPR027417 -
Mupr5655g00002 1515 Pfam ABC transporter transmembrane region 298 565 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr5655g00002 1515 Pfam ABC transporter transmembrane region 894 1137 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr5655g00002 1515 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1211 1445 IPR003439 GO:0005524
Mupr5655g00002 1515 CDD ABCC_MRP_domain2 1209 1429 - -
Mupr5655g00002 1515 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 298 578 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr5655g00002 1515 FunFam ABC transporter C family member 5 597 779 - -
Mupr5655g00002 1515 Pfam ABC transporter 630 764 IPR003439 GO:0005524
Mupr5655g00002 1515 SUPERFAMILY ABC transporter transmembrane region 892 1193 IPR036640 GO:0005524|GO:0016020
Mupr5655g00002 1515 CDD ABC_6TM_ABCC_D1 299 586 IPR044746 GO:0140359
Mupr5655g00002 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1202 1437 IPR027417 -
Mupr5655g00002 1515 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 894 1174 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr5655g00002 1515 SMART AAA_5 1237 1421 IPR003593 GO:0016887
Mupr5655g00002 1515 SMART AAA_5 639 831 IPR003593 GO:0016887
Mupr5655g00002 1515 Gene3D ABC transporter type 1, transmembrane domain 273 595 IPR036640 GO:0005524|GO:0016020
Mupr5655g00002 1515 Gene3D ABC transporter type 1, transmembrane domain 856 1192 IPR036640 GO:0005524|GO:0016020
Mupr5655g00002 1515 SUPERFAMILY ABC transporter transmembrane region 292 590 IPR036640 GO:0005524|GO:0016020
Mupr5655g00002 1515 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 612 839 IPR003439 GO:0005524
Mupr5655g00002 1515 FunFam ABC transporter C family member 5 855 1192 - -
Mupr5655g00002 1515 Gene3D - 1194 1447 IPR027417 -
Mupr5655g00002 1515 Pfam ABC transporter 1229 1376 IPR003439 GO:0005524
Mupr5655g00002 1515 CDD ABC_6TM_ABCC_D2 892 1186 IPR044726 GO:0140359
Mupr5655g00002 1515 CDD ABCC_MRP_domain1 612 777 - -
Mupr5655g00002 1515 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 220 1446 - -
Mupr5655g00002 1515 FunFam ABC transporter C family member 10 281 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5655g00002 Mupr-Chr5655 13410 23051 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5655g00002 612 822 Calmodulin-binding Proteins AT2G36910 26.255 5.21e-18 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5655g00002 - K05666 gmx:106794105 2353.56